RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 TLE4Q04727 773 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 SRSF4Q08170 494 aaKnown RBP10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 TAF9Q16594 264 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 PMS2CLQ68D20 193 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 OPN5Q6U736 354 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 MRPL41Q8IXM3 137 aaKnown RBP10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 ZIC4Q8N9L1 334 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 FBLN5Q9UBX5 448 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 KPTNQ9Y664 436 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 FRYQ5TBA9 3013 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 FREM1Q5H8C1 2179 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 NSG1A0A0A6YYJ2 146 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 DHRS3O75911 302 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 NXPH2O95156 264 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 MPZP25189 248 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 ZNF345Q14585 488 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 TMEM123Q8N131 208 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 OR5AP2Q8NGF4 316 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 CDC6Q99741 560 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 FAAP24Q9BTP7 215 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 SMIM3Q9BZL3 60 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 DHRS7CA6NNS2 312 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 SFT2D2O95562 160 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 RFPL3SP0C7P2 107 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 CD82P27701 267 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 MRPS11P82912 194 aaKnown RBP10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 RAB32Q13637 225 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 KCNMB1Q16558 191 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 CHRFAM7AQ494W8 412 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 SSC4DQ8WTU2 575 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 ASB13Q8WXK3 278 aa10.18□□□□□ -0.78
RAPGEF3-201ENST00000389212 CCDC187A0A096LP49 1063 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 C9J4A7 227 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 TRAPPC6AO75865 159 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 FGF5P12034 268 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 HLA-GP17693 338 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 TUBG1P23258 451 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 MTCP1P56278 107 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 VAX1Q5SQQ9 334 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 NAT6Q93015 286 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 R3HDM4Q96D70 268 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 NOL4LQ96MY1 436 aaPredicted RBP10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 SHANK1Q9Y566 2161 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 MSTNO14793 375 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 NME2P1O60361 137 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 SPINK2P20155 84 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 CAV2P51636 162 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 DSCR4P56555 118 aaPredicted RBP10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 CLN3Q13286 438 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 SLC35G3Q8N808 338 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 OR14L1PQ8NHC6 308 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 ANGPTL4Q9BY76 406 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 PLEKHJ1Q9NW61 149 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 A0A1W2PPQ1 181 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 TMEM210A6NLX4 147 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 LCATP04180 440 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 TBPP20226 339 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 TDGF1P3P51864 188 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 FAHD2BQ6P2I3 314 aaPredicted RBP10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 AGBL5Q8NDL9 886 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 OR1J1Q8NGS3 322 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 FGFBP3Q8TAT2 258 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 TMEM54Q969K7 222 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 PIK3IP1Q96FE7 263 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 FAHD2AQ96GK7 314 aa10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 ZNF845Q96IR2 970 aaPredicted RBP10.17□□□□□ -0.78
RAPGEF3-201ENST00000389212 NCKAP5O14513 1909 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 LOC102723996A0A087X1L8 192 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 CXCL13O43927 109 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 FPR2P25090 351 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 PTGER4P35408 488 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 TAS2R31P59538 309 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 HERPUD1Q15011 391 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 C9orf135Q5VTT2 229 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 Q6ZRG5 221 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 TOMM40LQ969M1 308 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 ZNF2Q9BSG1 426 aaPredicted RBP10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 GAB2Q9UQC2 676 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 OSGIN2Q9Y236 505 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 RBM7Q9Y580 266 aaKnown RBP10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 DNAJC13O75165 2243 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 IGKV1-27A0A075B6S5 117 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 A8MXE2 369 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 CDRT15L2A8MXV6 281 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 CST2P09228 141 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 LINC00614P0C842 121 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 THBS4P35443 961 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 TAGLN2P37802 199 aaKnown RBP10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 SP6Q3SY56 376 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 WIPI1Q5MNZ9 446 aaPredicted RBP10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 SLC25A24Q6NUK1 477 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 IL34Q6ZMJ4 242 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 PHYHIPLQ96FC7 376 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 CACFD1Q9UGQ2 172 aa10.16□□□□□ -0.78
RAPGEF3-201ENST00000389212 HIST1H2BKO60814 126 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 ONECUT2O95948 504 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 HIST1H2BJP06899 126 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 HIST1H2BOP23527 126 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 HIST1H2BBP33778 126 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 SUCLG1P53597 346 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms