RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 HIST1H1BP16401 226 aaKnown RBP8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 ZFP36L1Q07352 338 aaKnown RBP8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 GNMTQ14749 295 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 SHBQ15464 509 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 EXT1Q16394 746 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 NKAIN1Q4KMZ8 207 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 TMEM42Q69YG0 159 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 SELENOHQ8IZQ5 122 aaKnown RBP8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 SLC25A45Q8N413 288 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 CCDC54Q8NEL0 328 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 TMEM56Q96MV1 263 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 OPA3Q9H6K4 179 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 P4HTMQ9NXG6 502 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 TMEM56-RWDD3S4R434 201 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 CEP290O15078 2479 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 FRYLO94915 3013 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 CCDC163A0A0D9SF12 145 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 CXorf65A6NEN9 183 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 SLC33A1O00400 549 aaPredicted RBP8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 CYB5BO43169 146 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 NXPH3O95157 252 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 CDS2O95674 445 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 HSPB1P04792 205 aaKnown RBP8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 TRIM61Q5EBN2 209 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 ZNF774Q6NX45 483 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 ZNF100Q8IYN0 542 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 FRZBQ92765 325 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 NAT6Q93015 286 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 SLC7A11Q9UPY5 501 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 WSB1Q9Y6I7 421 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 C2CD4DB7Z1M9 353 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 NKX2-1P43699 371 aaPredicted RBP8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 PAX9P55771 341 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 HNRNPKP61978 463 aaKnown RBP eCLIP8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 GAMTQ14353 236 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 ZNF266Q14584 549 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 NMSQ5H8A3 153 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 ZNF468Q5VIY5 522 aaPredicted RBP8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 SYT13Q7L8C5 426 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 TBC1D26Q86UD7 250 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 OSR2Q8N2R0 312 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 SPACA9Q96E40 222 aaPredicted RBP8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 PLEKHF2Q9H8W4 249 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 AKIRIN1Q9H9L7 192 aaPredicted RBP8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 ST3GAL6Q9Y274 331 aa8.07□□□□□ -1.12
NHLRC3-202ENST00000379600 ADAM20O43506 726 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 CELA2AP08217 269 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 PATE4P0C8F1 98 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 TRGC1P0CF51 173 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 ZNF154Q13106 437 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 KRTAP27-1Q3LI81 207 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 FAM90A2PQ658T7 463 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 DBX2Q6ZNG2 339 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 ZNF818PQ6ZRF7 136 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 CALHM1Q8IU99 346 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 DMRTC2Q8IXT2 367 aaPredicted RBP8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 TMEM217Q8N7C4 229 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 TVP23CQ96ET8 276 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 SSX3Q99909 188 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 HIPK2Q9H2X6 1198 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 ZNF286AQ9HBT8 521 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 SLC7A10Q9NS82 523 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 WNT16Q9UBV4 365 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 CNTRLQ7Z7A1 2325 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 IGKV1D-13A0A0B4J2D9 117 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 TLX3O43711 291 aaPredicted RBP8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 RNF224P0DH78 156 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 IGKV1-13P0DP09 117 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 S100A2P29034 98 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 RBP2P50120 134 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 DEFA6Q01524 100 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 FAM27BQ5VT28 67 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 HS3ST6Q96QI5 342 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 ZNF700Q9H0M5 742 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 PROK2Q9HC23 129 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 RNF115Q9Y4L5 304 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 SDK1Q7Z5N4 2213 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 NCKAP5O14513 1909 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 CABIN1Q9Y6J0 2220 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 CLEC18AA5D8T8 446 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 BTBD17A6NE02 478 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 PDCD6O75340 191 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 F10P00742 488 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 CEACAM1P13688 526 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 NPBWR2P48146 333 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 HERPUD1Q15011 391 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 ZNF385CQ66K41 422 aaPredicted RBP8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 SSX7Q7RTT5 188 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 SLC35E3Q7Z769 313 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 CLEC18CQ8NCF0 446 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 OR5L2Q8NGL0 311 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 SPTSSAQ969W0 71 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 BCO1Q9HAY6 547 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 TAAR3PQ9P1P4 343 aa8.06□□□□□ -1.12
NHLRC3-202ENST00000379600 LOC102723971A0A1B0GUV8 181 aa8.05□□□□□ -1.12
NHLRC3-202ENST00000379600 A0A1B0GV90 55 aa8.05□□□□□ -1.12
NHLRC3-202ENST00000379600 ZFAND5O76080 213 aa8.05□□□□□ -1.12
NHLRC3-202ENST00000379600 GLB1P16278 677 aa8.05□□□□□ -1.12
NHLRC3-202ENST00000379600 PLA2G5P39877 138 aa8.05□□□□□ -1.12
NHLRC3-202ENST00000379600 RGS19P49795 217 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms