RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 A0A0A6YYD4 124 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 NAP1L6A6NFF2 107 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 K7EPK0 472 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 C1QBP02746 253 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 MPGP29372 298 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 BTCP35070 178 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 CEACAM6P40199 344 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 PPT1P50897 306 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 LSM6P62312 80 aaKnown RBP6.97□□□□□ -1.29
CKAP2-203ENST00000378037 POLR2GP62487 172 aaKnown RBP eCLIP6.97□□□□□ -1.29
CKAP2-203ENST00000378037 MRPS10P82664 201 aaKnown RBP6.97□□□□□ -1.29
CKAP2-203ENST00000378037 IFITM2Q01629 132 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 LGALSLQ3ZCW2 172 aaPredicted RBP6.97□□□□□ -1.29
CKAP2-203ENST00000378037 TEX30Q5JUR7 227 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 TMEM123Q8N131 208 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 FAM71E2Q8N5Q1 922 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 PRSS33Q8NF86 280 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 DECR2Q9NUI1 292 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 KCNMB2Q9Y691 235 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 IGKV1-27A0A075B6S5 117 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 TRBV5-7A0A0A0MS05 114 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 MED6O75586 246 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 FUT3P21217 361 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 S100A11P31949 105 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 FUT6P51993 359 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 CTAG1AP78358 180 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 ZNF718Q3SXZ3 478 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 DEGS2Q6QHC5 323 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 UNQ9370/PRO34162Q6UXP9 181 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 TMUB2Q71RG4 321 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 VKORC1L1Q8N0U8 176 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 CXorf58Q96LI9 332 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 TAAR3PQ9P1P4 343 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 PCDHB10Q9UN67 800 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 IGKV1-12A0A0C4DH73 117 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 TERTO14746 1132 aaKnown RBP6.97□□□□□ -1.29
CKAP2-203ENST00000378037 IGKV1D-12P01611 117 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 IGHV1-2P23083 117 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 CD80P33681 288 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 THBS4P35443 961 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 ARR3P36575 388 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 GNG3P63215 75 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 ZP4Q12836 540 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 LILRB2Q8N423 598 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 LILRB4Q8NHJ6 448 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 CA5BP1Q8WTZ4 195 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 IGFBPL1Q8WX77 278 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 IP6K3Q96PC2 410 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 CLCC1Q96S66 551 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 OR1A1Q9P1Q5 309 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 FAM96BQ9Y3D0 163 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 FBXO7Q9Y3I1 522 aa6.97□□□□□ -1.29
CKAP2-203ENST00000378037 LOC105371267A0A1B0GV96 52 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 OR5H1A6NKK0 313 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 CEBPZOSA8MTT3 80 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 CCL21O00585 134 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 TM4SF5O14894 197 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 ST8SIA5O15466 376 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 CYB5R3P00387 301 aaPredicted RBP6.96□□□□□ -1.29
CKAP2-203ENST00000378037 HOXA6P31267 233 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 SSTR5P35346 364 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 TAS2R46P59540 309 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 ZP1P60852 638 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 RAP2BP61225 183 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 DYRK1AQ13627 763 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 RNPS1Q15287 305 aaKnown RBP6.96□□□□□ -1.29
CKAP2-203ENST00000378037 AVPI1Q5T686 147 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 CD276Q5ZPR3 534 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 TFAP2EQ6VUC0 442 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 GAPTQ8N292 157 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 FAM213BQ8TBF2 198 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 GPX8Q8TED1 209 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 TECTBQ96PL2 329 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 RTL8AQ9BWD3 113 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 MOB1AQ9H8S9 216 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 TNFRSF19Q9NS68 423 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 NECAP2Q9NVZ3 263 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 DCAF16Q9NXF7 216 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 MEMO1Q9Y316 297 aa6.96□□□□□ -1.29
CKAP2-203ENST00000378037 COL5A1P20908 1838 aaPredicted RBP6.96□□□□□ -1.29
CKAP2-203ENST00000378037 IGHV3-21A0A0B4J1V1 117 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 C9orf170A2RU37 121 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 NKX2-6A6NCS4 301 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 TDGF1P13385 188 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 TUBG1P23258 451 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 TMEM267Q0VDI3 215 aaPredicted RBP6.96□□□□□ -1.3
CKAP2-203ENST00000378037 GHITMQ9H3K2 345 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 SPEF1Q9Y4P9 236 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 ZNF106Q9H2Y7 1883 aaKnown RBP6.96□□□□□ -1.3
CKAP2-203ENST00000378037 FAM24AA6NFZ4 105 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 FAM157AC9JC47 383 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 CYTIPO60759 359 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 HEXAP06865 529 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 S100A1P23297 94 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 COX7A1P24310 79 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 MECP2P51608 486 aaKnown RBP6.96□□□□□ -1.3
CKAP2-203ENST00000378037 P2RX3P56373 397 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 B3GALT5-AS1P59052 145 aa6.96□□□□□ -1.3
CKAP2-203ENST00000378037 RPS27AP62979 156 aaKnown RBP6.96□□□□□ -1.3
CKAP2-203ENST00000378037 TESK1Q15569 626 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms