RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 CPEB3Q8NE35 698 aaKnown RBP10.53□□□□□ -0.72
UBR4-203ENST00000375225 SMIM8Q96KF7 97 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 MICU1Q9BPX6 476 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 FAM212BQ9NTI7 297 aaPredicted RBP10.53□□□□□ -0.72
UBR4-203ENST00000375225 PLA2G3Q9NZ20 509 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 ZNF629Q9UEG4 869 aaPredicted RBP10.53□□□□□ -0.72
UBR4-203ENST00000375225 LSM5Q9Y4Y9 91 aaKnown RBP10.53□□□□□ -0.72
UBR4-203ENST00000375225 LRP5LA4QPB2 252 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 ST8SIA3O43173 380 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 SNAPINO95295 136 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 CDS2O95674 445 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 PPYP01298 95 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 IGHV3-9P01782 118 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 IL32P24001 234 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 HAAOP46952 286 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 SULT1A2P50226 295 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 RAB5CP51148 216 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 CCL11P51671 97 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 RAB1AP62820 205 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 ZNF169Q14929 603 aaPredicted RBP10.53□□□□□ -0.72
UBR4-203ENST00000375225 FBXW12Q6X9E4 464 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 FOXRED2Q8IWF2 684 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 NEK7Q8TDX7 302 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 MRPL24Q96A35 216 aaKnown RBP10.53□□□□□ -0.72
UBR4-203ENST00000375225 C18orf12Q96KH6 178 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 TREM1Q9NP99 234 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 PARP11Q9NR21 331 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 PRR13Q9NZ81 148 aa10.53□□□□□ -0.72
UBR4-203ENST00000375225 MYO7BQ6PIF6 2116 aa10.52□□□□□ -0.72
UBR4-203ENST00000375225 MED12Q93074 2177 aa10.52□□□□□ -0.72
UBR4-203ENST00000375225 MSGN1A6NI15 193 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 ZNF732B4DXR9 585 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 F8W036 122 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 PHF1O43189 567 aaPredicted RBP10.52□□□□□ -0.73
UBR4-203ENST00000375225 KLK10O43240 276 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 F2RL1P55085 397 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 GNG3P63215 75 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 HMGN3Q15651 99 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 DEFB109BQ30KR1 87 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 CMTM1Q8IZ96 169 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 UBAC2Q8NBM4 344 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 NAXEQ8NCW5 288 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 MDS2Q8NDY4 140 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 SCNM1Q9BWG6 230 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 SEC11CQ9BY50 192 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 GLRX2Q9NS18 164 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 COQ3Q9NZJ6 369 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 LHX6Q9UPM6 363 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 ZNF175Q9Y473 711 aa10.52□□□□□ -0.73
UBR4-203ENST00000375225 PTPRZ1P23471 2315 aaPredicted RBP10.51□□□□□ -0.73
UBR4-203ENST00000375225 MED13Q9UHV7 2174 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 A0A096LPE4 126 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 C3orf85A0A1B0GTC6 90 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 A0A1W2PPZ6 126 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 TRDCB7Z8K6 153 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 GPR31O00270 319 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 MPPED1O15442 326 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 MED6O75586 246 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 HLA-HP01893 362 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 WT1P19544 449 aaPredicted RBP10.51□□□□□ -0.73
UBR4-203ENST00000375225 BCL3P20749 454 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 AADACP22760 399 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 MDH2P40926 338 aaKnown RBP10.51□□□□□ -0.73
UBR4-203ENST00000375225 GPM6AP51674 278 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 TBC1D28Q2M2D7 210 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 PHLDA2Q53GA4 152 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 PXDC1Q5TGL8 231 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 FAM122CQ6P4D5 195 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 CALHM1Q8IU99 346 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 ZNF695Q8IW36 515 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 Q8IYB0 196 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 SLAMF9Q96A28 289 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 POM121L2Q96KW2 1035 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 PKIBQ9C010 78 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 ZNF552Q9H707 407 aaPredicted RBP10.51□□□□□ -0.73
UBR4-203ENST00000375225 Q9N2K0 584 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 RCC2Q9P258 522 aaKnown RBP10.51□□□□□ -0.73
UBR4-203ENST00000375225 FBXL17Q9UF56 701 aa10.51□□□□□ -0.73
UBR4-203ENST00000375225 CARHSP1Q9Y2V2 147 aaKnown RBP10.51□□□□□ -0.73
UBR4-203ENST00000375225 UBE2J1Q9Y385 318 aaPredicted RBP10.51□□□□□ -0.73
UBR4-203ENST00000375225 STRAPQ9Y3F4 350 aaKnown RBP10.51□□□□□ -0.73
UBR4-203ENST00000375225 TNRC6AQ8NDV7 1962 aaKnown RBP10.5□□□□□ -0.73
UBR4-203ENST00000375225 DMXL1Q9Y485 3027 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 TRBV6-6A0A0A6YYG2 114 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 CD300LBA8K4G0 201 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 SS18L1O75177 396 aaPredicted RBP10.5□□□□□ -0.73
UBR4-203ENST00000375225 SLC34A2O95436 690 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 SEC11BP0C7V7 166 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 FAM157CP0CG43 387 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 MMP9P14780 707 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 RFC3P40938 356 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 CAV2P51636 162 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 TMEM33P57088 247 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 TGFBR3Q03167 851 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 IL24Q13007 206 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 ZNF766Q5HY98 468 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 SPIN3Q5JUX0 258 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 RPL7L1Q6DKI1 246 aaKnown RBP10.5□□□□□ -0.73
UBR4-203ENST00000375225 MOB1BQ7L9L4 216 aa10.5□□□□□ -0.73
UBR4-203ENST00000375225 NUFIP2Q7Z417 695 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms