RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ABHD3Q8WU67 409 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 NEIL1Q96FI4 390 aaPredicted RBP12.67□□□□□ -0.38
TRAF1-201ENST00000373887 IGLV3-16A0A075B6K0 115 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 A0A1W2PQF6 199 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 HRKO00198 91 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 SCGB1A1P11684 91 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 DLX1P56177 255 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 TNFAIP6P98066 277 aaPredicted RBP12.67□□□□□ -0.38
TRAF1-201ENST00000373887 RHBDD2Q6NTF9 364 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 DOK1Q99704 481 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 ELOBQ15370 118 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 HIST3H3Q16695 136 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 RND1Q92730 232 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 KCNK15Q9H427 330 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 LAMB2P55268 1798 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 FBLL1A6NHQ2 334 aaKnown RBP12.67□□□□□ -0.38
TRAF1-201ENST00000373887 HIST1H1DP16402 221 aaKnown RBP12.67□□□□□ -0.38
TRAF1-201ENST00000373887 PABPC1L2AQ5JQF8 200 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 CBLN3Q6UW01 205 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 TMEM108Q6UXF1 575 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 LPAR2Q9HBW0 351 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 TMED3Q9Y3Q3 217 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 MARF1Q9Y4F3 1742 aaKnown RBP12.66□□□□□ -0.38
TRAF1-201ENST00000373887 ARG1P05089 322 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 FTH1P19P0C7X4 201 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 C21orf58P58505 322 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 OR52L2PQ8NGH6 319 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 MCHR2Q969V1 340 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 MMP25Q9NPA2 562 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 H7C2G1 150 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 M0R3E3 92 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 AP4M1O00189 453 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 CCL21O00585 134 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 MPZL1O95297 269 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 HOXC4P09017 264 aaPredicted RBP12.66□□□□□ -0.38
TRAF1-201ENST00000373887 SUCLG1P53597 346 aaKnown RBP12.66□□□□□ -0.38
TRAF1-201ENST00000373887 RNFT1Q5M7Z0 435 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 DOLPP1Q86YN1 238 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 ARRDC1Q8N5I2 433 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 OR2Y1Q8NGV0 311 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 OR1L1Q8NH94 360 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 PP6455Q8WZ26 134 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 RAB40CQ96S21 281 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 DNAJB12Q9NXW2 375 aaKnown RBP12.66□□□□□ -0.38
TRAF1-201ENST00000373887 RALYQ9UKM9 306 aaKnown RBP12.66□□□□□ -0.38
TRAF1-201ENST00000373887 MFNGO00587 321 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 ZNF32P17041 273 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 RTP5Q14D33 572 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 HLA-DRB5Q30154 266 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 FAHD1Q6P587 224 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 ASB13Q8WXK3 278 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 NTNG2Q96CW9 530 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 LINC00052Q96N35 136 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 SH2D2AQ9NP31 389 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 A0A1B0GTH9 108 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 HPXP02790 462 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 PRRX1P54821 245 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 WDR73Q6P4I2 378 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 BHLHA15Q7RTS1 189 aaPredicted RBP12.66□□□□□ -0.38
TRAF1-201ENST00000373887 Q8IYB0 196 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 MRPL54Q6P161 138 aaKnown RBP12.66□□□□□ -0.38
TRAF1-201ENST00000373887 D2HGDHQ8N465 521 aa12.66□□□□□ -0.38
TRAF1-201ENST00000373887 KIAA1217Q5T5P2 1943 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 KIR2DS2P43631 304 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 ZDHHC22Q8N966 263 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 FKBP11Q9NYL4 201 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 AMMECR1Q9Y4X0 333 aaPredicted RBP12.65□□□□□ -0.38
TRAF1-201ENST00000373887 LIPGQ9Y5X9 500 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 CNTRLQ7Z7A1 2325 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 LY86O95711 162 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 CRISP2P16562 243 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 ACP1P24666 158 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 RASL10BQ96S79 203 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 CROCCQ5TZA2 2017 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 M0R143 59 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 RGS13O14921 159 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 KCNAB3O43448 404 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 NDUFB6O95139 128 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 PTGFRP43088 359 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 DHRS2Q13268 280 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 SEZ6L2Q6UXD5 910 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 TBC1D26Q86UD7 250 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 TM4SF19Q96DZ7 209 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 NPAS1Q99742 590 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 TMEM191AQ9H0A3 160 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 NAA60Q9H7X0 242 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 DUXBA0A1W2PPF3 345 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 PGA3P0DJD8 388 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 CLLU1Q5K131 121 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 PMS2CLQ68D20 193 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 SP7Q8TDD2 431 aaPredicted RBP12.65□□□□□ -0.38
TRAF1-201ENST00000373887 ISOC2Q96AB3 205 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 FBXL17Q9UF56 701 aa12.65□□□□□ -0.38
TRAF1-201ENST00000373887 LOC389332A0A1B0GUA5 103 aa12.65□□□□□ -0.39
TRAF1-201ENST00000373887 ARRDC5A6NEK1 342 aa12.65□□□□□ -0.39
TRAF1-201ENST00000373887 TBX19O60806 448 aa12.65□□□□□ -0.39
TRAF1-201ENST00000373887 NKX2-2O95096 273 aa12.65□□□□□ -0.39
TRAF1-201ENST00000373887 TRIP11Q15643 1979 aa12.65□□□□□ -0.39
TRAF1-201ENST00000373887 DPPA3Q6W0C5 159 aa12.65□□□□□ -0.39
TRAF1-201ENST00000373887 TMEM251Q8N6I4 163 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms