RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 TGFBR1P36897 503 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 RPS19P39019 145 aaKnown RBP12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 KCNJ3P48549 501 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 SERPINB10P48595 397 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 RPS27AP62979 156 aaKnown RBP12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 PAX2Q02962 417 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 UNC119Q13432 240 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 GRK1Q15835 563 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 TAF9Q16594 264 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 USP43Q70EL4 1123 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 GDPD3Q7L5L3 318 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 C8orf46Q8TAG6 207 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 PTX4Q96A99 478 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 DACT3Q96B18 629 aaPredicted RBP12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 SMR3AQ99954 134 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 DAPK2Q9UIK4 370 aa12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 RPUSD1Q9UJJ7 312 aaKnown RBP12.87□□□□□ -0.35
PRPF38B-202ENST00000370022 MAP1AP78559 2803 aaPredicted RBP12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 IGHV2-70DA0A0C4DH43 119 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 KIR2DS1A0A191URI9 304 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 FUOMA2VDF0 154 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 J3QLI3 93 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 LDLRAD4O15165 306 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 RAB6AP20340 208 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 DCAF12L2Q5VW00 463 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 OR10K2Q6IF99 312 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 H1FXQ92522 213 aaKnown RBP12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 SLC25A46Q96AG3 418 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 LPAR3Q9UBY5 353 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 RAB22AQ9UL26 194 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 INSIG2Q9Y5U4 225 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 YLPM1P49750 1951 aaKnown RBP12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 TRAV24A0A0B4J272 114 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 A8MV72 311 aaPredicted RBP12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 C22orf46C9J442 243 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 GLAP06280 429 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 SLC2A2P11168 524 aaPredicted RBP12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 ERP29P30040 261 aaKnown RBP12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 OR3A1P47881 315 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 RBM39Q14498 530 aaKnown RBP12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 PAN3Q58A45 887 aaKnown RBP12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 LY6G5BQ8NDX9 201 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 OR4S1Q8NGB4 309 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 NUDT16L1Q9BRJ7 211 aaKnown RBP12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 DPCDQ9BVM2 203 aaPredicted RBP12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 MMP26Q9NRE1 261 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 TMEM160Q9NX00 188 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 RCC2Q9P258 522 aaKnown RBP12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 F8P00451 2351 aa12.86□□□□□ -0.35
PRPF38B-202ENST00000370022 TMEM272A0A1B0GTI8 110 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 A0A1W2PPH5 198 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 RPL31P62899 125 aaKnown RBP12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 PAX5Q02548 391 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 MEF2CQ06413 473 aaPredicted RBP12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 PDCD1Q15116 288 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 ATAD3CQ5T2N8 411 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 IDNKQ5T6J7 187 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 FGFRL1Q8N441 504 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 FAM89BQ8N5H3 189 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 SUMF2Q8NBJ7 301 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 KCTD12Q96CX2 325 aaKnown RBP12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 BARHL1Q9BZE3 327 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 CHST6Q9GZX3 395 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 LPAR5Q9H1C0 372 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 DCSTAMPQ9H295 470 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 PPA2Q9H2U2 334 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 KCNK15Q9H427 330 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 YAE1D1Q9NRH1 226 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 ABRACLQ9P1F3 81 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 ETV7Q9Y603 341 aa12.85□□□□□ -0.35
PRPF38B-202ENST00000370022 METTL21EPA6NDL7 271 aa12.84□□□□□ -0.35
PRPF38B-202ENST00000370022 PPIAL4GP0DN37 164 aa12.84□□□□□ -0.35
PRPF38B-202ENST00000370022 FUT3P21217 361 aa12.84□□□□□ -0.35
PRPF38B-202ENST00000370022 EDDM3BP56851 147 aa12.84□□□□□ -0.35
PRPF38B-202ENST00000370022 BLMHQ13867 455 aa12.84□□□□□ -0.35
PRPF38B-202ENST00000370022 FAHD2BQ6P2I3 314 aaPredicted RBP12.84□□□□□ -0.35
PRPF38B-202ENST00000370022 TEX29Q8N6K0 151 aa12.84□□□□□ -0.35
PRPF38B-202ENST00000370022 OR56B1Q8NGI3 324 aa12.84□□□□□ -0.35
PRPF38B-202ENST00000370022 FAHD2AQ96GK7 314 aa12.84□□□□□ -0.35
PRPF38B-202ENST00000370022 NEDD4LQ96PU5 975 aa12.84□□□□□ -0.35
PRPF38B-202ENST00000370022 NCOR1P1Q9H4R4 102 aa12.84□□□□□ -0.35
PRPF38B-202ENST00000370022 MALRD1Q5VYJ5 2156 aa12.84□□□□□ -0.35
PRPF38B-202ENST00000370022 A0A1W2PQ09 198 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 hADV38S2A0JD32 116 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 MCRIP1C9JLW8 97 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 PDCD6O75340 191 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 RORCP51449 518 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 P2RX3P56373 397 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 PAX8Q06710 450 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 EDDM3AQ14507 147 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 RAB12Q6IQ22 244 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 KIR3DL3Q8N743 410 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 ISOC1Q96CN7 298 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 GSX1Q9H4S2 264 aaPredicted RBP12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 C19orf12Q9NSK7 152 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 PEX16Q9Y5Y5 336 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 CEPT1Q9Y6K0 416 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 HIVEP1P15822 2718 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 ABCA2Q9BZC7 2435 aa12.83□□□□□ -0.36
PRPF38B-202ENST00000370022 A0A0B4J203 849 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms