RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 EPHA1P21709 976 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 MTNR1BP49286 362 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 PRB3Q04118 309 aaPredicted RBP12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 RSU1Q15404 277 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 PIGYQ3MUY2 71 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 Q6P435 159 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 NR2C2APQ86WQ0 139 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 FAM185AQ8N0U4 392 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 Q8N7P7 452 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 Q8NFD4 153 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 OR4D6Q8NGJ1 314 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 C22orf15Q8WYQ4 148 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 FAM234AQ9H0X4 552 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 SEBOXQ9HB31 216 aaPredicted RBP12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 TCF7L1Q9HCS4 588 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 ZNF581Q9P0T4 197 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 MRPS28Q9Y2Q9 187 aaKnown RBP12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 A0A1W2PQ09 198 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 MEX3AA1L020 520 aaKnown RBP12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 J3QRK9 145 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 ARL6IP5O75915 188 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 SRMP19623 302 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 SERPINA2P20848 420 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 GABRR1P24046 479 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 OR3A1P47881 315 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 SCN1BQ07699 218 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 IDNKQ5T6J7 187 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 METTL11BQ5VVY1 283 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 OR8H2Q8N162 312 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 NKAIN3Q8N8D7 197 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 OR4S1Q8NGB4 309 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 PHYHIPQ92561 330 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 SNX22Q96L94 193 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 C1orf147Q96MC9 270 aaPredicted RBP12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 METTL9Q9H1A3 318 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 IL36GQ9NZH8 169 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 AK6Q9Y3D8 172 aaKnown RBP12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 SOX21Q9Y651 276 aaPredicted RBP12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 TRBV23-1A0A0A0MS06 115 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 SH2D1BO14796 132 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 ZNF44P15621 663 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 S100A5P33763 92 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 SRSF2Q01130 221 aaKnown RBP12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 MADCAM1Q13477 382 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 EDDM3AQ14507 147 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 GRK1Q15835 563 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 METAP1DQ6UB28 335 aaPredicted RBP12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 GLIPR1L1Q6UWM5 242 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 VMO1Q7Z5L0 202 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 TEX29Q8N6K0 151 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 TPRX1Q8N7U7 411 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 OR51T1Q8NGJ9 327 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 GFI1Q99684 422 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 NXF2Q9GZY0 626 aaKnown RBP12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 ZNF69Q9UC07 566 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 GLS2Q9UI32 602 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 NUP50Q9UKX7 468 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 KPTNQ9Y664 436 aa12.4□□□□□ -0.42
SMPDL3A-201ENST00000368440 RAB3BP20337 219 aa12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 EDDM3BP56851 147 aa12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 RPL31P62899 125 aaKnown RBP12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 ZNF273Q14593 569 aa12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 SLC22A6Q4U2R8 563 aa12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 AWAT2Q6E213 333 aa12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 CDH26Q8IXH8 852 aa12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 BCL6BQ8N143 479 aaPredicted RBP12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 KIR3DL3Q8N743 410 aa12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 S100A13Q99584 98 aa12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 PPA2Q9H2U2 334 aa12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 SIRT7Q9NRC8 400 aa12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 COMMD3Q9UBI1 195 aa12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 DAPK2Q9UIK4 370 aa12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 JMJD1CQ15652 2540 aa12.39□□□□□ -0.43
SMPDL3A-201ENST00000368440 A0A0G2JK05 382 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 SLC33A1O00400 549 aaPredicted RBP12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 SLC2A2P11168 524 aaPredicted RBP12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 CCL3L1P16619 93 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 LMO1P25800 156 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 RUSC1-AS1Q66K80 236 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 TMEM200BQ69YZ2 307 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 BRD3OSQ6XYD6 125 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 GDPD3Q7L5L3 318 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 TCF23Q7RTU1 214 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 LAX1Q8IWV1 398 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 PDZD9Q8IXQ8 264 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 OSR2Q8N2R0 312 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 LHX4Q969G2 390 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 SLC6A7Q99884 636 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 ST3GAL6Q9Y274 331 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 CENPVL3A0A0U1RRI6 287 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 MEGF11A6BM72 1044 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 DEGS1O15121 323 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 CSTBP04080 98 aaKnown RBP12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 RBM11P57052 281 aaKnown RBP12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 ERVFRD-1P60508 538 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 KLRD1Q13241 179 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 IL13RA2Q14627 380 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 DMRTB1Q96MA1 342 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 UQCC2Q9BRT2 126 aa12.38□□□□□ -0.43
SMPDL3A-201ENST00000368440 KCNK15Q9H427 330 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms