RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 PHF1O43189 567 aaPredicted RBP8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 HLA-HP01893 362 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 PRH1P02810 166 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 MEOX1P50221 254 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 PRSS12P56730 875 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 CLN3Q13286 438 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 LIAT1Q6ZQX7 453 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 TMEM251Q8N6I4 163 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 TMEM105Q8N8V8 129 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 SLC2A9Q9NRM0 540 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 FOXJ2Q9P0K8 574 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 TMED3Q9Y3Q3 217 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 NCOA6Q14686 2063 aaPredicted RBP8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.05□□□□□ -1.126e-7■■■■□ 24.6
GTF3C2-202ENST00000359541 H0YIZ8 118 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 FGF16O43320 207 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 TNFSF15O95150 251 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 OR5AC1P0C628 307 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 RNF224P0DH78 156 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 RPS2P15880 293 aaKnown RBP8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 CLDN18P56856 261 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 SHEQ5VZ18 495 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 CRIP3Q6Q6R5 217 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 ZNF573Q86YE8 665 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 CMTM1Q8IZ96 169 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 LHFPL5Q8TAF8 219 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 MOB3AQ96BX8 217 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 SIGLEC12Q96PQ1 595 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 TMUB1Q9BVT8 246 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 NKX6-2Q9C056 277 aaPredicted RBP8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 DECR2Q9NUI1 292 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 LPAR3Q9UBY5 353 aa8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 ZNF629Q9UEG4 869 aaPredicted RBP8.05□□□□□ -1.12
GTF3C2-202ENST00000359541 FAM221AA4D161 298 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 ST8SIA3O43173 380 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 LRP3O75074 770 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 MED6O75586 246 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 DEDDO75618 318 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 GAPDHP04406 335 aaKnown RBP8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 SP1P08047 785 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 NTF4P34130 210 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 ARG2P78540 354 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 RSPO4Q2I0M5 234 aaPredicted RBP8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 CEACAM21Q3KPI0 293 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 LINC00596Q86U02 117 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 ZNF695Q8IW36 515 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 SLC5A7Q9GZV3 580 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 FAM212BQ9NTI7 297 aaPredicted RBP8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 PLA2G3Q9NZ20 509 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 TUBD1Q9UJT1 453 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 MPC1Q9Y5U8 109 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 IGKV1D-8A0A087WSZ0 117 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 OR5B21A6NL26 309 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 SLC34A2O95436 690 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 FGF12P61328 243 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 TGFBR3Q03167 851 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 ZNF124Q15973 351 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 GPR157Q5UAW9 335 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 ARL6IP6Q8N6S5 226 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 BOLLQ8N9W6 283 aaKnown RBP8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 OR5A2Q8NGI9 324 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 RRNAD1Q96FB5 475 aaKnown RBP8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 ZNF732B4DXR9 585 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 SNAPINO95295 136 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 VAMP2P63027 116 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 PJVKQ0ZLH3 352 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 IL13RA2Q14627 380 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 CDCP2Q5VXM1 449 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 FGFBP3Q8TAT2 258 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 MRPL24Q96A35 216 aaKnown RBP8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 TMEM9BQ9NQ34 198 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 EML6Q6ZMW3 1958 aa8.04□□□□□ -1.12
GTF3C2-202ENST00000359541 IGKV1-12A0A0C4DH73 117 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 TMEM218A2RU14 115 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 MPTX1A8MV57 137 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 TERTO14746 1132 aaKnown RBP8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 PPYP01298 95 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 IGKV1D-12P01611 117 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 GPM6AP51674 278 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 MEX3BQ6ZN04 569 aaKnown RBP8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 COLCA1Q6ZS62 124 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 CPEB3Q8NE35 698 aaKnown RBP8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 SLAMF9Q96A28 289 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 HRH4Q9H3N8 390 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 LHX6Q9UPM6 363 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 KLF2Q9Y5W3 355 aaPredicted RBP8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 ACACBO00763 2458 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 MSGN1A6NI15 193 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 KCNAB3O43448 404 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 GPR137BO60478 399 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 ATG12O94817 140 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 HKR1P10072 659 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 HOXC12P31275 282 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 ADAMTS17Q8TE56 1095 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 SLC39A7Q92504 469 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 BARX1Q9HBU1 254 aaPredicted RBP8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 H7C1Q1 480 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 HMGB3O15347 200 aaKnown RBP8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 NME2P1O60361 137 aa8.03□□□□□ -1.12
GTF3C2-202ENST00000359541 NME2P22392 152 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms