RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 PPA2Q9H2U2 334 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 IFT22Q9H7X7 185 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 SLC25A10Q9UBX3 287 aaPredicted RBP12.34□□□□□ -0.43
CCNE1-202ENST00000357943 ETV7Q9Y603 341 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 CREBBPQ92793 2442 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 A0A075B6Q4 140 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FAM90A10PA6NDY2 464 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FAM90A18PA6NE21 464 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FAM90A16PA6NEW6 464 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FAM90A20PA6NIJ5 464 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FAM90A8PA6NJQ4 464 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FAM90A7PA6NKC0 464 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FAM90A22PA8MWA6 464 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FAM90A12PA8MX19 464 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FAM90A5PA8MXJ8 464 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FAM90A23PA8MXZ1 464 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 NDUFB3O43676 98 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 HEXAP06865 529 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 INHBBP09529 407 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FAM90A15PP0C7V4 464 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FAM90A13PP0C7W8 464 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FAM90A14PP0C7W9 464 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FAM90A24PP0C7X0 464 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 OR3A1P47881 315 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 TMEM50BP56557 158 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 TMEM249Q2WGJ8 235 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 LRRC10Q5BKY1 277 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 SPNS3Q6ZMD2 512 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 SUMF2Q8NBJ7 301 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 CHST4Q8NCG5 386 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 ST8SIA4Q92187 359 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 AP3S1Q92572 193 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 PPP1R14BQ96C90 147 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 LPAR2Q9HBW0 351 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 RHBDL2Q9NX52 303 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 RCC2Q9P258 522 aaKnown RBP12.33□□□□□ -0.43
CCNE1-202ENST00000357943 PEX16Q9Y5Y5 336 aa12.33□□□□□ -0.43
CCNE1-202ENST00000357943 FLNAP21333 2647 aaKnown RBP12.33□□□□□ -0.44
CCNE1-202ENST00000357943 ANK3Q12955 4377 aaKnown RBP12.33□□□□□ -0.44
CCNE1-202ENST00000357943 MALRD1Q5VYJ5 2156 aa12.33□□□□□ -0.44
CCNE1-202ENST00000357943 FOXI3A8MTJ6 420 aaPredicted RBP12.33□□□□□ -0.44
CCNE1-202ENST00000357943 KIAA1324LA8MWY0 1029 aaPredicted RBP12.33□□□□□ -0.44
CCNE1-202ENST00000357943 NDUFB7P17568 137 aa12.33□□□□□ -0.44
CCNE1-202ENST00000357943 BLVRBP30043 206 aaPredicted RBP12.33□□□□□ -0.44
CCNE1-202ENST00000357943 LCN2P80188 198 aa12.33□□□□□ -0.44
CCNE1-202ENST00000357943 GRK1Q15835 563 aa12.33□□□□□ -0.44
CCNE1-202ENST00000357943 PAN3Q58A45 887 aaKnown RBP12.33□□□□□ -0.44
CCNE1-202ENST00000357943 NKAPLQ5M9Q1 402 aa12.33□□□□□ -0.44
CCNE1-202ENST00000357943 OR8H2Q8N162 312 aa12.33□□□□□ -0.44
CCNE1-202ENST00000357943 SAMD12Q8N8I0 201 aa12.33□□□□□ -0.44
CCNE1-202ENST00000357943 ACOT12Q8WYK0 555 aa12.33□□□□□ -0.44
CCNE1-202ENST00000357943 COX4I2Q96KJ9 171 aa12.33□□□□□ -0.44
CCNE1-202ENST00000357943 DPCDQ9BVM2 203 aaPredicted RBP12.33□□□□□ -0.44
CCNE1-202ENST00000357943 FAM234AQ9H0X4 552 aa12.33□□□□□ -0.44
CCNE1-202ENST00000357943 ATG5Q9H1Y0 275 aa12.33□□□□□ -0.44
CCNE1-202ENST00000357943 METTL21EPA6NDL7 271 aa12.32□□□□□ -0.44
CCNE1-202ENST00000357943 RAB27BO00194 218 aa12.32□□□□□ -0.44
CCNE1-202ENST00000357943 PDCD6O75340 191 aa12.32□□□□□ -0.44
CCNE1-202ENST00000357943 CHATP28329 748 aa12.32□□□□□ -0.44
CCNE1-202ENST00000357943 NPY4RP50391 375 aa12.32□□□□□ -0.44
CCNE1-202ENST00000357943 ATXN7L3Q14CW9 347 aaPredicted RBP12.32□□□□□ -0.44
CCNE1-202ENST00000357943 RAB12Q6IQ22 244 aa12.32□□□□□ -0.44
CCNE1-202ENST00000357943 C6orf201Q7Z4U5 140 aa12.32□□□□□ -0.44
CCNE1-202ENST00000357943 CMTM4Q8IZR5 234 aa12.32□□□□□ -0.44
CCNE1-202ENST00000357943 TPRX1Q8N7U7 411 aa12.32□□□□□ -0.44
CCNE1-202ENST00000357943 DRAXINQ8NBI3 349 aaPredicted RBP12.32□□□□□ -0.44
CCNE1-202ENST00000357943 OR56B1Q8NGI3 324 aa12.32□□□□□ -0.44
CCNE1-202ENST00000357943 POM121Q96HA1 1249 aa12.32□□□□□ -0.44
CCNE1-202ENST00000357943 C6orf62Q9GZU0 229 aaPredicted RBP12.32□□□□□ -0.44
CCNE1-202ENST00000357943 SPACA1Q9HBV2 294 aa12.32□□□□□ -0.44
CCNE1-202ENST00000357943 ING3Q9NXR8 418 aa12.32□□□□□ -0.44
CCNE1-202ENST00000357943 CR1P17927 2039 aa12.32□□□□□ -0.44
CCNE1-202ENST00000357943 A8MXK9 166 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 C22orf46C9J442 243 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 HPGDSO60760 199 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 IGHV4-31P0DP07 118 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 FUT3P21217 361 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 AESQ08117 197 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 EDDM3AQ14507 147 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 PLAC9Q5JTB6 97 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 BTN2A1Q7KYR7 527 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 OR4M1Q8NGD0 313 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 OR5D13Q8NGL4 314 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 PPP1R35Q8TAP8 253 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 H1FXQ92522 213 aaKnown RBP12.31□□□□□ -0.44
CCNE1-202ENST00000357943 C1orf159Q96HA4 380 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 ARHGAP5-AS1Q96IT6 56 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 NEDD4LQ96PU5 975 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 ABCA2Q9BZC7 2435 aa12.31□□□□□ -0.44
CCNE1-202ENST00000357943 CTDSP2O14595 271 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 MGST3O14880 152 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 CSN2P05814 226 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 EIF4EP06730 217 aaKnown RBP12.3□□□□□ -0.44
CCNE1-202ENST00000357943 EDDM3BP56851 147 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 FAM189A2Q15884 450 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 UBE2NLQ5JXB2 153 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 MZT2AQ6P582 158 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 Q6ZTK2 550 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 GDPD3Q7L5L3 318 aa12.3□□□□□ -0.44
CCNE1-202ENST00000357943 OR10R2Q8NGX6 335 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms