RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SIGLEC5O15389 551 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 ENSAO43768 121 aaKnown RBP6.28□□□□□ -1.4
VCAN-202ENST00000342785 CHST1O43916 411 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 LYZL6O75951 148 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 PRF1P14222 555 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 OR3A1P47881 315 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 P2RY1P47900 373 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 SIGLEC14Q08ET2 396 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 ZNF766Q5HY98 468 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 C15orf54Q8N8G6 183 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 DNASE2BQ8WZ79 361 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 ANGPTL4Q9BY76 406 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 OR5AC2Q9NZP5 309 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 CASP8AP2Q9UKL3 1982 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 RALGAPA2Q2PPJ7 1873 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 NKX2-6A6NCS4 301 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 PSG4Q00888 419 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 AWAT1Q58HT5 328 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 OVCH2Q7RTZ1 564 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 MARVELD3Q96A59 401 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 SEC11CQ9BY50 192 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 SLC26A1Q9H2B4 701 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 UBE2L5PA0A1B0GUS4 154 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 NPIPB13A6NJU9 1138 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 LRRC30A6NM36 301 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 NPIPB4C9JG80 1138 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 J3QRE1 110 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 TGOLN2O43493 480 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 SYNGR2O43760 224 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 ARG1P05089 322 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 MAGEA5P43359 124 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 P2RY4P51582 365 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 ZXDAP98168 799 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 C3AR1Q16581 482 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 DEFB109BQ30KR1 87 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 ACOT6Q3I5F7 207 aaPredicted RBP6.28□□□□□ -1.4
VCAN-202ENST00000342785 PMS2CLQ68D20 193 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.28□□□□□ -1.4
VCAN-202ENST00000342785 PIPOXQ9P0Z9 390 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 NYNRINQ9P2P1 1898 aaKnown RBP6.28□□□□□ -1.4
VCAN-202ENST00000342785 ANK1P16157 1881 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 A0A0G2JMZ2 1700 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 IGKV1D-43A0A0B4J1Z2 117 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 MAP1LC3B2A6NCE7 125 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 CLDN34H7C241 214 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 M0R1X1 148 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 TIAF1O95411 115 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 F12P00748 615 aaPredicted RBP6.28□□□□□ -1.4
VCAN-202ENST00000342785 SEC11BP0C7V7 166 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 RAB13P51153 203 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 SLC38A11Q08AI6 406 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 TMEM267Q0VDI3 215 aaPredicted RBP6.28□□□□□ -1.4
VCAN-202ENST00000342785 FABP9Q0Z7S8 132 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 IL24Q13007 206 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 GUCA2BQ16661 112 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 PUSL1Q8N0Z8 303 aaKnown RBP6.28□□□□□ -1.4
VCAN-202ENST00000342785 NRIP2Q9BQI9 281 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 MAP1LC3BQ9GZQ8 125 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 GAR1Q9NY12 217 aaKnown RBP6.28□□□□□ -1.4
VCAN-202ENST00000342785 OSGIN2Q9Y236 505 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 CDIPTO14735 213 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 RAMP1O60894 148 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 RCC1P18754 421 aaPredicted RBP6.28□□□□□ -1.4
VCAN-202ENST00000342785 BAGE3Q86Y29 109 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 BAGE2Q86Y30 109 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 OR13D1Q8NGV5 346 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 DAZAP1Q96EP5 407 aaKnown RBP6.28□□□□□ -1.4
VCAN-202ENST00000342785 ZNF236Q9UL36 1845 aa6.28□□□□□ -1.4
VCAN-202ENST00000342785 FCGR3AP08637 254 aa6.27□□□□□ -1.4
VCAN-202ENST00000342785 TLE1Q04724 770 aa6.27□□□□□ -1.4
VCAN-202ENST00000342785 MS4A3Q96HJ5 214 aa6.27□□□□□ -1.4
VCAN-202ENST00000342785 LRRC37A2A6NM11 1700 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 SCGB2A1O75556 95 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 APOA2P02652 100 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 RD3LP0DJH9 198 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 H3F3AP84243 136 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 MPV17LQ2QL34 196 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 ZNF528Q3MIS6 628 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 TMPRSS7Q7RTY8 843 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 SCCPDHQ8NBX0 429 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 GDF15Q99988 308 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 EGLN1Q9GZT9 426 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 PSG11Q9UQ72 335 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 MFSD2BA6NFX1 497 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 NKX6-3A6NJ46 265 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 DEFB108AA8MXU0 73 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 TRDCB7Z8K6 153 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 F6UZH7 168 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 UBE2G2P60604 165 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 RBPJQ06330 500 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 OR2A2Q6IF42 318 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 CISD2Q8N5K1 135 aaKnown RBP6.27□□□□□ -1.41
VCAN-202ENST00000342785 RBMXL3Q8N7X1 1067 aaKnown RBP6.27□□□□□ -1.41
VCAN-202ENST00000342785 AKIRIN1Q9H9L7 192 aaPredicted RBP6.27□□□□□ -1.41
VCAN-202ENST00000342785 RPH3ALQ9UNE2 315 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 PDCD11Q14690 1871 aaKnown RBP6.27□□□□□ -1.41
VCAN-202ENST00000342785 J3QT63 122 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 EWSR1Q01844 656 aaKnown RBP eCLIP6.27□□□□□ -1.41
VCAN-202ENST00000342785 C2orf68Q2NKX9 166 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 C17orf78Q8N4C9 275 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms