RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 ZIC3O60481 467 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 JTBO76095 146 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 NTF4P34130 210 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 THBS4P35443 961 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 PTGDSP41222 190 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 MLF1P58340 268 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 PCOLCEQ15113 449 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 ALKBH6Q3KRA9 238 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 KMT5CQ86Y97 462 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 THNSL2Q86YJ6 484 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 LGI3Q8N145 548 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 ADPRHL1Q8NDY3 354 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 RFESDQ8TAC1 157 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 WBP1Q96G27 269 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 SDSLQ96GA7 329 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 HS3ST6Q96QI5 342 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 EDEM2Q9BV94 578 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 NMES1Q9C002 83 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 FAM117AQ9C073 453 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 LIME1Q9H400 295 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 MMP26Q9NRE1 261 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 GNG13Q9P2W3 67 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 TIMM10BQ9Y5J6 103 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 SPG11Q96JI7 2443 aa10.89□□□□□ -0.67
LMX1A-202ENST00000342310 IGKV1-27A0A075B6S5 117 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 TFF1P04155 84 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 RAB1AP62820 205 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 ARG2P78540 354 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 ZNF345Q14585 488 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 GAPTQ8N292 157 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 TPRX1Q8N7U7 411 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 UCK1Q9HA47 277 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 ZNF705GA8MUZ8 300 aaPredicted RBP10.88□□□□□ -0.67
LMX1A-202ENST00000342310 IGLV3-19P01714 112 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 FCGR3AP08637 254 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 TBPP20226 339 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 PTAFRP25105 342 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 MAGEA5P43359 124 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 QRFPP83859 136 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 ZNF154Q13106 437 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 HIKESHIQ53FT3 197 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 DCAF12Q5T6F0 453 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 ERRFI1Q9UJM3 462 aaPredicted RBP10.88□□□□□ -0.67
LMX1A-202ENST00000342310 A0A0U1RQK1 487 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 NDUFS6O75380 124 aaKnown RBP10.88□□□□□ -0.67
LMX1A-202ENST00000342310 SNAPC5O75971 98 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 SLC34A2O95436 690 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 RAB11AP62491 216 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 RAC1P63000 192 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 SPANXN5Q5MJ07 72 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 TMEM105Q8N8V8 129 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 SAP25Q8TEE9 199 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 TP53RKQ96S44 253 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 TRAPPC2LQ9UL33 140 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 LIPGQ9Y5X9 500 aa10.88□□□□□ -0.67
LMX1A-202ENST00000342310 IGKV1-12A0A0C4DH73 117 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 OR2C1O95371 312 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 CST4P01036 141 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 IGKV1D-12P01611 117 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 UMODP07911 640 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 ACAA1P09110 424 aaPredicted RBP10.87□□□□□ -0.67
LMX1A-202ENST00000342310 TAGLN2P37802 199 aaKnown RBP10.87□□□□□ -0.67
LMX1A-202ENST00000342310 HOXA1P49639 335 aaPredicted RBP10.87□□□□□ -0.67
LMX1A-202ENST00000342310 UBE2KP61086 200 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 VHLLQ6RSH7 139 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 LILRB2Q8N423 598 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 HINT2Q9BX68 163 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 NAA60Q9H7X0 242 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 A0A1B0GTQ1 180 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 SMCO3A2RU48 225 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 SYNGR1O43759 233 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 VAMP5O95183 116 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 PNLIPRP3Q17RR3 467 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 DHRS13Q6UX07 377 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 DPPA2Q7Z7J5 298 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 CMTM1Q8IZ96 169 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 C1orf147Q96MC9 270 aaPredicted RBP10.87□□□□□ -0.67
LMX1A-202ENST00000342310 ARRDC1-AS1Q9H2J1 176 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 LOXL2Q9Y4K0 774 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 GJE1A6NN92 205 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 DEFB108AA8MXU0 73 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 TMEM127O75204 238 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 IL2RAP01589 272 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 SSX9Q7RTT3 188 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 TBC1D26Q86UD7 250 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 C17orf82Q86X59 251 aaPredicted RBP10.87□□□□□ -0.67
LMX1A-202ENST00000342310 UBAC2Q8NBM4 344 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 RBMXL1Q96E39 390 aaKnown RBP10.87□□□□□ -0.67
LMX1A-202ENST00000342310 PNRC2Q9NPJ4 139 aaKnown RBP10.87□□□□□ -0.67
LMX1A-202ENST00000342310 GPR27Q9NS67 375 aa10.87□□□□□ -0.67
LMX1A-202ENST00000342310 ATRXP46100 2492 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 MUC22E2RYF6 1773 aaPredicted RBP10.86□□□□□ -0.67
LMX1A-202ENST00000342310 LOC390937A0A1W2PQ73 354 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 MSTNO14793 375 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 PPYP01298 95 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 IGHMP01871 453 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 METTL15P1P0C7V9 234 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 CALCRP30988 508 aa10.86□□□□□ -0.67
LMX1A-202ENST00000342310 MECP2P51608 486 aaKnown RBP10.86□□□□□ -0.67
LMX1A-202ENST00000342310 ZNF133P52736 654 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms