RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 FOXJ3Q9UPW0 622 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 COX6B1P14854 86 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 ZNF880Q6PDB4 577 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 OR1K1Q8NGR3 316 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 SEC11CQ9BY50 192 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 CRYBG1Q9Y4K1 1723 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 A0A1B0GUH1 482 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 MFSD2BA6NFX1 497 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 NUDT3O95989 172 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 ID1P41134 155 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 POLR2GP62487 172 aaKnown RBP eCLIP10.43□□□□□ -0.74
SHANK2-201ENST00000338508 APOBEC4Q8WW27 367 aaKnown RBP10.43□□□□□ -0.74
SHANK2-201ENST00000338508 DMRTA2Q96SC8 542 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 NPAS1Q99742 590 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 SPAARA0A1B0GVQ0 90 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 DHRS7CA6NNS2 312 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 MMP15P51511 669 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 TMEM171Q8WVE6 324 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 ZNF552Q9H707 407 aaPredicted RBP10.43□□□□□ -0.74
SHANK2-201ENST00000338508 RALYQ9UKM9 306 aaKnown RBP10.43□□□□□ -0.74
SHANK2-201ENST00000338508 CDIPTO14735 213 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 KLF7O75840 302 aaPredicted RBP10.43□□□□□ -0.74
SHANK2-201ENST00000338508 PF4V1P10720 104 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 FPR2P25090 351 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 RAB32Q13637 225 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 IL11RAQ14626 422 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 LIAT1Q6ZQX7 453 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 RNF165Q6ZSG1 346 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 C16orf92Q96LL3 132 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 OR2A5Q96R48 311 aa10.43□□□□□ -0.74
SHANK2-201ENST00000338508 SPTY2D1-AS1A0A0U1RR47 76 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 CST4P01036 141 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 IGKV3-20P01619 116 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 PWWP2BQ6NUJ5 590 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 ZNF680Q8NEM1 530 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 PRRX2Q99811 253 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 ZNFX1Q9P2E3 1918 aaKnown RBP10.42□□□□□ -0.74
SHANK2-201ENST00000338508 COMPP49747 757 aaPredicted RBP10.42□□□□□ -0.74
SHANK2-201ENST00000338508 HYAL1Q12794 435 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 HERPUD1Q15011 391 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 HIKESHIQ53FT3 197 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 TM4SF20Q53R12 229 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 OR4S2Q8NH73 311 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 SPSB1Q96BD6 273 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 STARD4Q96DR4 205 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 SCN1AP35498 2009 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 PIKFYVEQ9Y2I7 2098 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 RGS13O14921 159 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 PTBP1P26599 531 aaKnown RBP eCLIP10.42□□□□□ -0.747e-8■■■■□ 24.5
SHANK2-201ENST00000338508 UQCRFS1P47985 274 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 CLDN18P56856 261 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 PPP1R1AQ13522 171 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 OR8G5Q8NG78 346 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 GPR27Q9NS67 375 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 IGHV3-72A0A0B4J1Y9 119 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 KIR3DL2P43630 455 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 ID4P47928 161 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 CACNG7P62955 275 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 LY6EQ16553 131 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 IZUMO4Q1ZYL8 232 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 ZNF441Q8N8Z8 693 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 TINAGQ9UJW2 476 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 AP4M1O00189 453 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 HIST1H1DP16402 221 aaKnown RBP10.42□□□□□ -0.74
SHANK2-201ENST00000338508 C21orf62-AS1Q17RA5 79 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 MPV17LQ2QL34 196 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 SSX8Q7RTT4 187 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 SNRNP40Q96DI7 357 aaKnown RBP10.42□□□□□ -0.74
SHANK2-201ENST00000338508 HARBI1Q96MB7 349 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 DICER1Q9UPY3 1922 aaKnown RBP10.42□□□□□ -0.74
SHANK2-201ENST00000338508 A0A0A6YYD5 115 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 SNRPGP15A8MWD9 76 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 HAND1O96004 215 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 CST2P09228 141 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 FAM157CP0CG43 387 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 SERGEFQ9UGK8 458 aa10.42□□□□□ -0.74
SHANK2-201ENST00000338508 C5P01031 1676 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 IGHV3OR16-10A0A075B7F0 116 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 LOC107984156A0A0G2JMH3 177 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 RIGQ13278 110 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 MMDQ15546 238 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 NUFIP2Q7Z417 695 aaKnown RBP10.41□□□□□ -0.74
SHANK2-201ENST00000338508 ARL17AQ8IVW1 177 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 ELOVL1Q9BW60 279 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 C9orf170A2RU37 121 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 HIST1H1EP10412 219 aaKnown RBP10.41□□□□□ -0.74
SHANK2-201ENST00000338508 GABRA1P14867 456 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 MDH2P40926 338 aaKnown RBP10.41□□□□□ -0.74
SHANK2-201ENST00000338508 GABRA6Q16445 453 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 C10orf113Q5VZT2 155 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 NHLRC1Q6VVB1 395 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 OR4B1Q8NGF8 309 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 RAB40CQ96S21 281 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 MMP26Q9NRE1 261 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 SLC6A1P30531 599 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 SNRPEP62304 92 aaKnown RBP10.41□□□□□ -0.74
SHANK2-201ENST00000338508 SLC35B1P78383 322 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 KLRB1Q12918 225 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 SYS1Q8N2H4 156 aa10.41□□□□□ -0.74
SHANK2-201ENST00000338508 NTNG2Q96CW9 530 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms