RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 FCN3O75636 299 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 OR7C1O76099 320 aaPredicted RBP12.73□□□□□ -0.37
SEC13-201ENST00000337354 MPIG6BO95866 241 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 CSN2P05814 226 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 GLAP06280 429 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 CLEC2LP0C7M8 214 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 SELLP14151 372 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 ERP29P30040 261 aaKnown RBP12.73□□□□□ -0.37
SEC13-201ENST00000337354 KCNJ3P48549 501 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 CLDN12P56749 244 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 GRK1Q15835 563 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 OR10K2Q6IF99 312 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 USP43Q70EL4 1123 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 GDPD3Q7L5L3 318 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 LY6G5BQ8NDX9 201 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 C8orf46Q8TAG6 207 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 FAM46BQ96A09 425 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 DACT3Q96B18 629 aaPredicted RBP12.73□□□□□ -0.37
SEC13-201ENST00000337354 NAA50Q9GZZ1 169 aaKnown RBP12.73□□□□□ -0.37
SEC13-201ENST00000337354 DAPK2Q9UIK4 370 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 RPUSD1Q9UJJ7 312 aaKnown RBP12.73□□□□□ -0.37
SEC13-201ENST00000337354 RAB22AQ9UL26 194 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 INSIG2Q9Y5U4 225 aa12.73□□□□□ -0.37
SEC13-201ENST00000337354 TRAV24A0A0B4J272 114 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 IGHV2-70DA0A0C4DH43 119 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 A0A1W2PPH5 198 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 A8MV72 311 aaPredicted RBP12.72□□□□□ -0.37
SEC13-201ENST00000337354 ZNF16P17020 682 aaPredicted RBP12.72□□□□□ -0.37
SEC13-201ENST00000337354 RAB6AP20340 208 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 TGFBR1P36897 503 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 SERPINB10P48595 397 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 RIPPLY3P57055 190 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 UNC119Q13432 240 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 RBM39Q14498 530 aaKnown RBP12.72□□□□□ -0.37
SEC13-201ENST00000337354 PDCD1Q15116 288 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 DCAF12L2Q5VW00 463 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 FAM89BQ8N5H3 189 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 OR4S1Q8NGB4 309 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 H1FXQ92522 213 aaKnown RBP12.72□□□□□ -0.37
SEC13-201ENST00000337354 SLC25A46Q96AG3 418 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 NUDT16L1Q9BRJ7 211 aaKnown RBP12.72□□□□□ -0.37
SEC13-201ENST00000337354 BARHL1Q9BZE3 327 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 MMP26Q9NRE1 261 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 TMEM160Q9NX00 188 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 ABRACLQ9P1F3 81 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 LPAR3Q9UBY5 353 aa12.72□□□□□ -0.37
SEC13-201ENST00000337354 YLPM1P49750 1951 aaKnown RBP12.72□□□□□ -0.37
SEC13-201ENST00000337354 SMIM30A4D0T7 59 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 C22orf46C9J442 243 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 MCRIP1C9JLW8 97 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 NOL3O60936 208 aaKnown RBP12.71□□□□□ -0.37
SEC13-201ENST00000337354 PPIAL4GP0DN37 164 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 SLC2A2P11168 524 aaPredicted RBP12.71□□□□□ -0.37
SEC13-201ENST00000337354 FUT3P21217 361 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 OR3A1P47881 315 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 RPL31P62899 125 aaKnown RBP12.71□□□□□ -0.37
SEC13-201ENST00000337354 PAX5Q02548 391 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 MEF2CQ06413 473 aaPredicted RBP12.71□□□□□ -0.37
SEC13-201ENST00000337354 PAX8Q06710 450 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 PAN3Q58A45 887 aaKnown RBP12.71□□□□□ -0.37
SEC13-201ENST00000337354 ATAD3CQ5T2N8 411 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 FAHD2BQ6P2I3 314 aaPredicted RBP12.71□□□□□ -0.37
SEC13-201ENST00000337354 TEX29Q8N6K0 151 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 SUMF2Q8NBJ7 301 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 FAHD2AQ96GK7 314 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 DPCDQ9BVM2 203 aaPredicted RBP12.71□□□□□ -0.37
SEC13-201ENST00000337354 LPAR5Q9H1C0 372 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 NCOR1P1Q9H4R4 102 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 YAE1D1Q9NRH1 226 aa12.71□□□□□ -0.37
SEC13-201ENST00000337354 RCC2Q9P258 522 aaKnown RBP12.71□□□□□ -0.37
SEC13-201ENST00000337354 TLN2Q9Y4G6 2542 aa12.71□□□□□ -0.38
SEC13-201ENST00000337354 C2CD3Q4AC94 2353 aa12.7□□□□□ -0.38
SEC13-201ENST00000337354 TMEM272A0A1B0GTI8 110 aa12.7□□□□□ -0.38
SEC13-201ENST00000337354 METTL21EPA6NDL7 271 aa12.7□□□□□ -0.38
SEC13-201ENST00000337354 RORCP51449 518 aa12.7□□□□□ -0.38
SEC13-201ENST00000337354 EDDM3BP56851 147 aa12.7□□□□□ -0.38
SEC13-201ENST00000337354 IDNKQ5T6J7 187 aa12.7□□□□□ -0.38
SEC13-201ENST00000337354 FGFRL1Q8N441 504 aa12.7□□□□□ -0.38
SEC13-201ENST00000337354 KCTD12Q96CX2 325 aaKnown RBP12.7□□□□□ -0.38
SEC13-201ENST00000337354 NEDD4LQ96PU5 975 aa12.7□□□□□ -0.38
SEC13-201ENST00000337354 CHST6Q9GZX3 395 aa12.7□□□□□ -0.38
SEC13-201ENST00000337354 DCSTAMPQ9H295 470 aa12.7□□□□□ -0.38
SEC13-201ENST00000337354 C7orf69Q9H7B7 122 aa12.7□□□□□ -0.38
SEC13-201ENST00000337354 PEX16Q9Y5Y5 336 aa12.7□□□□□ -0.38
SEC13-201ENST00000337354 ETV7Q9Y603 341 aa12.7□□□□□ -0.38
SEC13-201ENST00000337354 ABCA1O95477 2261 aa12.7□□□□□ -0.38
SEC13-201ENST00000337354 hADV38S2A0JD32 116 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 PDCD6O75340 191 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 CA11O75493 328 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 P2RX3P56373 397 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 DYNC1I2Q13409 638 aaKnown RBP12.69□□□□□ -0.38
SEC13-201ENST00000337354 BLMHQ13867 455 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 RAB12Q6IQ22 244 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 C1orf122Q6ZSJ8 110 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 OR56B1Q8NGI3 324 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 PPA2Q9H2U2 334 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 KPTNQ9Y664 436 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 CEPT1Q9Y6K0 416 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 ZANQ9Y493 2812 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 CSPG4Q6UVK1 2322 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms