RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 FAM90A10PA6NDY2 464 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM90A18PA6NE21 464 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM90A16PA6NEW6 464 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM90A20PA6NIJ5 464 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM90A8PA6NJQ4 464 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM90A7PA6NKC0 464 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM90A22PA8MWA6 464 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM90A12PA8MX19 464 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM90A5PA8MXJ8 464 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM90A23PA8MXZ1 464 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 GPR37O15354 613 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 ECDO95905 644 aaPredicted RBP11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM90A15PP0C7V4 464 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM90A13PP0C7W8 464 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM90A14PP0C7W9 464 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM90A24PP0C7X0 464 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 RAB6AP20340 208 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 EDDM3AQ14507 147 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 BRICD5Q6PL45 260 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 GDPD3Q7L5L3 318 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 BPIFB2Q8N4F0 458 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 OR5H6Q8NGV6 325 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 POM121Q96HA1 1249 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 SMR3AQ99954 134 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 MRI1Q9BV20 369 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 DPCDQ9BVM2 203 aaPredicted RBP11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 SPACA1Q9HBV2 294 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 ABRACLQ9P1F3 81 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 ABCA2Q9BZC7 2435 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 C22orf46C9J442 243 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 MGST3O14880 152 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 BLVRBP30043 206 aaPredicted RBP11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 VEGFCP49767 419 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 SIGIRRQ6IA17 410 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 RAB12Q6IQ22 244 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 GLCCI1Q86VQ1 547 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM89BQ8N5H3 189 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 OR4M1Q8NGD0 313 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 PTX4Q96A99 478 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 TMEM186Q96B77 213 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 NEDD4LQ96PU5 975 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 DCTN5Q9BTE1 182 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 ATG5Q9H1Y0 275 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 MMP26Q9NRE1 261 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 ING3Q9NXR8 418 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 NDUFA13Q9P0J0 144 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 POLR3KQ9Y2Y1 108 aaPredicted RBP11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 PEX16Q9Y5Y5 336 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 ETV7Q9Y603 341 aa11.66□□□□□ -0.54
APOBEC3B-202ENST00000335760 FLNAP21333 2647 aaKnown RBP11.65□□□□□ -0.54
APOBEC3B-202ENST00000335760 TRAV20A0A0B4J274 112 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 METTL21EPA6NDL7 271 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 MCRIP1C9JLW8 97 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 H3BUI4 141 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 SOCS1O15524 211 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 CD5LO43866 347 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 PDCD6O75340 191 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 ZNF182P17025 639 aaPredicted RBP11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 FUT3P21217 361 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 DVL1P1P54792 670 aaPredicted RBP11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 EDDM3BP56851 147 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 SCAND1P57086 179 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 KRTAP1-1Q07627 177 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 AESQ08117 197 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 ATXN7L3Q14CW9 347 aaPredicted RBP11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 C11orf91Q3C1V1 193 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 NKAPLQ5M9Q1 402 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 BIVMQ86UB2 503 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 OR56B1Q8NGI3 324 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 DYNC2LI1Q8TCX1 351 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 RAB40AQ8WXH6 277 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 KCTD12Q96CX2 325 aaKnown RBP11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 NUDT16L1Q9BRJ7 211 aaKnown RBP11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 C19orf12Q9NSK7 152 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 HIF1ANQ9NWT6 349 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 RCC2Q9P258 522 aaKnown RBP11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 RPUSD1Q9UJJ7 312 aaKnown RBP11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 SPATA2Q9UM82 520 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 DOCK11Q5JSL3 2073 aa11.65□□□□□ -0.55
APOBEC3B-202ENST00000335760 MALRD1Q5VYJ5 2156 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 ARHGAP32A7KAX9 2087 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 CELSR1Q9NYQ6 3014 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 IGHV2-70DA0A0C4DH43 119 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 ZNF701M0R085 212 aaPredicted RBP11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 ENSAO43768 121 aaKnown RBP11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 LY6G6DO95868 133 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 CSN2P05814 226 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 CHATP28329 748 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 SOX6P35712 828 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 KCNJ3P48549 501 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 RPL31P62899 125 aaKnown RBP11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 PAX2Q02962 417 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 RBM39Q14498 530 aaKnown RBP11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 FAM189A2Q15884 450 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 KRBOX4Q5JUW0 171 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 FAM185AQ8N0U4 392 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 TPRX1Q8N7U7 411 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 NEK7Q8TDX7 302 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 ACOT12Q8WYK0 555 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 AP3S1Q92572 193 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms