RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 OR4D9Q8NGE8 314 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 OR1N2Q8NGR9 330 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 RFESDQ8TAC1 157 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 SSMEM1Q8WWF3 244 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 SPACA9Q96E40 222 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF275Q9NSD4 429 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-201ENST00000334504 TNFSF18Q9UNG2 199 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 MYO18AQ92614 2054 aaKnown RBP8.7□□□□□ -1.02
COL4A6-201ENST00000334504 TGIF2-C20orf24A0A0A6YYL0 155 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 CA6P23280 308 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 MRPL58Q14197 206 aaKnown RBP8.7□□□□□ -1.02
COL4A6-201ENST00000334504 DGAT2L7PQ6IED9 249 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 MSRB3Q8IXL7 192 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 OR1L1Q8NH94 360 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 PATE1Q8WXA2 126 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 ALKBH3Q96Q83 286 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-201ENST00000334504 C4AP0C0L4 1744 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 C4BP0C0L5 1744 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 B4E171 279 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 HOXA6P31267 233 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF79Q15937 498 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 C12orf54Q6X4T0 127 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 WNT2BQ93097 391 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 LRRC3BQ96PB8 259 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 PDFQ9HBH1 243 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 LOC105371267A0A1B0GV96 52 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 DHRS7CA6NNS2 312 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 CYB5R3P00387 301 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-201ENST00000334504 MDH2P40926 338 aaKnown RBP8.7□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF345Q14585 488 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 PLPPR5Q32ZL2 321 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 PWWP2BQ6NUJ5 590 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 CYB561D1Q8N8Q1 229 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 WBP2Q969T9 261 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 TMEM204Q9BSN7 226 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 COL25A1Q9BXS0 654 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-201ENST00000334504 ADAMTS5Q9UNA0 930 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 SPRY3O43610 288 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 ADPRHP54922 357 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 FOXB1Q99853 325 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 STARD10Q9Y365 291 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 GNG3P63215 75 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 Q8IYB0 196 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 PRR7Q8TB68 274 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 MMP25Q9NPA2 562 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 HS3ST3A1Q9Y663 406 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 OR2W5A6NFC9 320 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 H0Y8X5 98 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 PDCD6O75340 191 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 ST6GAL1P15907 406 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 SURF2Q15527 256 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-201ENST00000334504 RGS7BPQ6MZT1 257 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-201ENST00000334504 RTL10Q7L3V2 364 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 TDHQ8IZJ6 230 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 FOXJ2Q9P0K8 574 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 SOX21Q9Y651 276 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-201ENST00000334504 HIST1H1EP10412 219 aaKnown RBP8.69□□□□□ -1.02
COL4A6-201ENST00000334504 MMP16P51512 607 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 CST9Q5W186 159 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 DMKNQ6E0U4 476 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-201ENST00000334504 LDLRAD3Q86YD5 345 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 HDGFL3Q9Y3E1 203 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 FAM90A27PA6NNH2 459 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 H0YIG0 161 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 PRRG2O14669 202 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 TNFSF15O95150 251 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 IFITM2Q01629 132 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 SPEM2Q0P670 501 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 DMRTA1Q5VZB9 504 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 TRDCB7Z8K6 153 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 SEC11BP0C7V7 166 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 CDKN2AP42771 156 aaKnown RBP8.69□□□□□ -1.02
COL4A6-201ENST00000334504 ONECUT1Q9UBC0 465 aa8.69□□□□□ -1.02
COL4A6-201ENST00000334504 TMEM238LA0A1B0GVL6 79 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 A6NJY4 79 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 J3KRW8 73 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 SOCS1O15524 211 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 CXorf1O96002 111 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 KHDC3LQ587J8 217 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 SGMS2Q8NHU3 365 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF502Q8TBZ5 544 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 OIT3Q8WWZ8 545 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 PCGF1Q9BSM1 259 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 MARCH5Q9NX47 278 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 NKX2-6A6NCS4 301 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 PTP4A3O75365 173 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 ATP6V0CP27449 155 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 SLC35B1P78383 322 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF770Q6IQ21 691 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-201ENST00000334504 OR2Z1Q8NG97 314 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 GPA33Q99795 319 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 GGACTQ9BVM4 153 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 M0R296 226 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 NMBP08949 121 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 OTX1P32242 354 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-201ENST00000334504 IFITM3Q01628 133 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 LYZL2Q7Z4W2 148 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 ADTRPQ96IZ2 230 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 SEBOXQ9HB31 216 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-201ENST00000334504 GPR27Q9NS67 375 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms