RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 NAA60Q9H7X0 242 aa14.91□□□□□ -0.02
DDX28-201ENST00000332395 KCNIP3Q9Y2W7 256 aa14.91□□□□□ -0.02
DDX28-201ENST00000332395 MPC1Q9Y5U8 109 aa14.91□□□□□ -0.02
DDX28-201ENST00000332395 MED12LQ86YW9 2145 aa14.91□□□□□ -0.02
DDX28-201ENST00000332395 PRSS44E7EML9 344 aa14.9□□□□□ -0.02
DDX28-201ENST00000332395 SYNGR1O43759 233 aa14.9□□□□□ -0.02
DDX28-201ENST00000332395 IGHG3P01860 377 aa14.9□□□□□ -0.02
DDX28-201ENST00000332395 S100A10P60903 97 aa14.9□□□□□ -0.02
DDX28-201ENST00000332395 HAGHLQ6PII5 290 aaPredicted RBP14.9□□□□□ -0.02
DDX28-201ENST00000332395 USB1Q9BQ65 265 aaKnown RBP14.9□□□□□ -0.02
DDX28-201ENST00000332395 SLC2A9Q9NRM0 540 aa14.9□□□□□ -0.02
DDX28-201ENST00000332395 RCC2Q9P258 522 aaKnown RBP14.9□□□□□ -0.02
DDX28-201ENST00000332395 CLCF1Q9UBD9 225 aa14.9□□□□□ -0.02
DDX28-201ENST00000332395 RPL35P42766 123 aaKnown RBP14.9□□□□□ -0.02
DDX28-201ENST00000332395 MPV17LQ2QL34 196 aa14.9□□□□□ -0.02
DDX28-201ENST00000332395 PHLDA2Q53GA4 152 aa14.9□□□□□ -0.02
DDX28-201ENST00000332395 GALNT14Q96FL9 552 aa14.9□□□□□ -0.02
DDX28-201ENST00000332395 NARS2Q96I59 477 aaKnown RBP14.9□□□□□ -0.02
DDX28-201ENST00000332395 AQP10Q96PS8 301 aa14.9□□□□□ -0.02
DDX28-201ENST00000332395 MLXQ9UH92 298 aa14.9□□□□□ -0.02
DDX28-201ENST00000332395 LOC400499M0QZD8 3231 aa14.9□□□□□ -0.02
DDX28-201ENST00000332395 EP300Q09472 2414 aaPredicted RBP14.89□□□□□ -0.03
DDX28-201ENST00000332395 IFNA21P01568 189 aa14.89□□□□□ -0.03
DDX28-201ENST00000332395 OR5AC1P0C628 307 aa14.89□□□□□ -0.03
DDX28-201ENST00000332395 UCP3P55916 312 aa14.89□□□□□ -0.03
DDX28-201ENST00000332395 TBC1D28Q2M2D7 210 aa14.89□□□□□ -0.03
DDX28-201ENST00000332395 IGSF11Q5DX21 431 aa14.89□□□□□ -0.03
DDX28-201ENST00000332395 GGNBP1Q5YKI7 109 aa14.89□□□□□ -0.03
DDX28-201ENST00000332395 OR2T2Q6IF00 324 aa14.89□□□□□ -0.03
DDX28-201ENST00000332395 IGFL2Q6UWQ7 119 aa14.89□□□□□ -0.03
DDX28-201ENST00000332395 GCNT2Q8N0V5 402 aa14.89□□□□□ -0.03
DDX28-201ENST00000332395 MRPL24Q96A35 216 aaKnown RBP14.89□□□□□ -0.03
DDX28-201ENST00000332395 CYTL1Q9NRR1 136 aa14.89□□□□□ -0.03
DDX28-201ENST00000332395 GLRX2Q9NS18 164 aa14.89□□□□□ -0.03
DDX28-201ENST00000332395 ASPMQ8IZT6 3477 aa14.89□□□□□ -0.03
DDX28-201ENST00000332395 ZNF318Q5VUA4 2279 aa14.89□□□□□ -0.03
DDX28-201ENST00000332395 RAB19A4D1S5 217 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 OR5B21A6NL26 309 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 NAPSAO96009 420 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 TPT1P13693 172 aaKnown RBP14.88□□□□□ -0.03
DDX28-201ENST00000332395 AADACP22760 399 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 AKR1D1P51857 326 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 HERV-K104P61576 105 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 GNG3P63215 75 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 TMEM187Q14656 261 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 SP6Q3SY56 376 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 SPATA46Q5T0L3 261 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 Q6ZS49 121 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 MYPOPQ86VE0 399 aaPredicted RBP14.88□□□□□ -0.03
DDX28-201ENST00000332395 ZNF573Q86YE8 665 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 C12orf57Q99622 126 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 DNAJB11Q9UBS4 358 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 ZNF14P17017 642 aaPredicted RBP14.88□□□□□ -0.03
DDX28-201ENST00000332395 SPINK2P20155 84 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 IGHV1-2P23083 117 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 NAAAQ02083 359 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 LDLRAD3Q86YD5 345 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 FOXRED2Q8IWF2 684 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 PUSL1Q8N0Z8 303 aaKnown RBP14.88□□□□□ -0.03
DDX28-201ENST00000332395 TSNAXQ99598 290 aaKnown RBP14.88□□□□□ -0.03
DDX28-201ENST00000332395 FAM86C1Q9NVL1 165 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 COA4Q9NYJ1 87 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 TUBD1Q9UJT1 453 aa14.88□□□□□ -0.03
DDX28-201ENST00000332395 URB1O60287 2271 aaKnown RBP14.88□□□□□ -0.03
DDX28-201ENST00000332395 SHANK1Q9Y566 2161 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 TMEM218A2RU14 115 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 GPR31O00270 319 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 HSPB6O14558 160 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 LRP3O75074 770 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 PPYP01298 95 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 CELA3BP08861 270 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 CA6P23280 308 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 DUSP1P28562 367 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 S100A12P80511 92 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 TGFBR3Q03167 851 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 SRSF7Q16629 238 aaKnown RBP eCLIP14.87□□□□□ -0.03
DDX28-201ENST00000332395 ZNF488Q96MN9 340 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 CNTNAP3BQ96NU0 1288 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 TRIB1Q96RU8 372 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 SYT3Q9BQG1 590 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 RSRP1Q9BUV0 290 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 SUCNR1Q9BXA5 334 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 CNTNAP3Q9BZ76 1288 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 Q9N2K0 584 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 A0A1W2PR80 420 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 WISP2O76076 250 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 FAM214BQ7L5A3 538 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 BAP18Q8IXM2 172 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 SVBPQ8N300 66 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 OR1S2Q8NGQ3 325 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 OR11L1Q8NGX0 322 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 NEK7Q8TDX7 302 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 PLK3Q9H4B4 646 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 ESRP2Q9H6T0 727 aaKnown RBP14.87□□□□□ -0.03
DDX28-201ENST00000332395 PLSCR2Q9NRY7 297 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 PCDHB10Q9UN67 800 aa14.87□□□□□ -0.03
DDX28-201ENST00000332395 ZFHX4Q86UP3 3567 aa14.86□□□□□ -0.03
DDX28-201ENST00000332395 TRAV17A0A0B4J275 112 aa14.86□□□□□ -0.03
DDX28-201ENST00000332395 RAB13P51153 203 aa14.86□□□□□ -0.03
DDX28-201ENST00000332395 UBE2NP61088 152 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms