RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 ADAMTSL5Q6ZMM2 481 aa15.33■□□□□ 0.04
SSNA1-201ENST00000322310 MEPCEQ7L2J0 689 aaKnown RBP15.33■□□□□ 0.04
SSNA1-201ENST00000322310 OR9G1Q8NH87 305 aa15.33■□□□□ 0.04
SSNA1-201ENST00000322310 LEAP2Q969E1 77 aa15.33■□□□□ 0.04
SSNA1-201ENST00000322310 COQ2Q96H96 371 aa15.33■□□□□ 0.04
SSNA1-201ENST00000322310 EXOSC4Q9NPD3 245 aaKnown RBP15.33■□□□□ 0.04
SSNA1-201ENST00000322310 PCDHB16Q9NRJ7 776 aa15.33■□□□□ 0.04
SSNA1-201ENST00000322310 TVP23BQ9NYZ1 205 aa15.33■□□□□ 0.04
SSNA1-201ENST00000322310 FUOMA2VDF0 154 aa15.32■□□□□ 0.04
SSNA1-201ENST00000322310 SYT7O43581 403 aa15.32■□□□□ 0.04
SSNA1-201ENST00000322310 CDX1P47902 265 aaPredicted RBP15.32■□□□□ 0.04
SSNA1-201ENST00000322310 GPR50Q13585 617 aa15.32■□□□□ 0.04
SSNA1-201ENST00000322310 SPATS1Q496A3 300 aa15.32■□□□□ 0.04
SSNA1-201ENST00000322310 BCDIN3DQ7Z5W3 292 aaKnown RBP15.32■□□□□ 0.04
SSNA1-201ENST00000322310 HS3ST5Q8IZT8 346 aa15.32■□□□□ 0.04
SSNA1-201ENST00000322310 KIRREL1Q96J84 757 aa15.32■□□□□ 0.04
SSNA1-201ENST00000322310 HRASLS5Q96KN8 279 aa15.32■□□□□ 0.04
SSNA1-201ENST00000322310 PPIL3Q9H2H8 161 aaKnown RBP15.32■□□□□ 0.04
SSNA1-201ENST00000322310 HMG20AQ9NP66 347 aa15.32■□□□□ 0.04
SSNA1-201ENST00000322310 ARL8BQ9NVJ2 186 aa15.32■□□□□ 0.04
SSNA1-201ENST00000322310 AMMECR1Q9Y4X0 333 aaPredicted RBP15.32■□□□□ 0.04
SSNA1-201ENST00000322310 AP4M1O00189 453 aa15.31■□□□□ 0.04
SSNA1-201ENST00000322310 SH2D1BO14796 132 aa15.31■□□□□ 0.04
SSNA1-201ENST00000322310 CYB5AP00167 134 aa15.31■□□□□ 0.04
SSNA1-201ENST00000322310 CST1P01037 141 aa15.31■□□□□ 0.04
SSNA1-201ENST00000322310 FRMD6-AS1P0C7T7 363 aa15.31■□□□□ 0.04
SSNA1-201ENST00000322310 GPR12P47775 334 aa15.31■□□□□ 0.04
SSNA1-201ENST00000322310 SCN1BQ07699 218 aa15.31■□□□□ 0.04
SSNA1-201ENST00000322310 FHL3Q13643 280 aa15.31■□□□□ 0.04
SSNA1-201ENST00000322310 KRBOX4Q5JUW0 171 aa15.31■□□□□ 0.04
SSNA1-201ENST00000322310 C16orf89Q6UX73 402 aa15.31■□□□□ 0.04
SSNA1-201ENST00000322310 SLC35F2Q8IXU6 374 aa15.31■□□□□ 0.04
SSNA1-201ENST00000322310 CITED4Q96RK1 184 aa15.31■□□□□ 0.04
SSNA1-201ENST00000322310 SLC25A19Q9HC21 320 aa15.31■□□□□ 0.04
SSNA1-201ENST00000322310 ARGLU1Q9NWB6 273 aaPredicted RBP15.31■□□□□ 0.04
SSNA1-201ENST00000322310 HYDINQ4G0P3 5121 aa15.3■□□□□ 0.04
SSNA1-201ENST00000322310 ZNF729A6NN14 1252 aaPredicted RBP15.3■□□□□ 0.04
SSNA1-201ENST00000322310 J3QR06 171 aa15.3■□□□□ 0.04
SSNA1-201ENST00000322310 PRKACGP22612 351 aa15.3■□□□□ 0.04
SSNA1-201ENST00000322310 RBP2P50120 134 aa15.3■□□□□ 0.04
SSNA1-201ENST00000322310 ATP1B3P54709 279 aa15.3■□□□□ 0.04
SSNA1-201ENST00000322310 ACTR3P61158 418 aa15.3■□□□□ 0.04
SSNA1-201ENST00000322310 FOXE3Q13461 319 aa15.3■□□□□ 0.04
SSNA1-201ENST00000322310 GK3PQ14409 553 aa15.3■□□□□ 0.04
SSNA1-201ENST00000322310 ATXN7L3Q14CW9 347 aaPredicted RBP15.3■□□□□ 0.04
SSNA1-201ENST00000322310 DHFR2Q86XF0 187 aa15.3■□□□□ 0.04
SSNA1-201ENST00000322310 RNF152Q8N8N0 203 aa15.3■□□□□ 0.04
SSNA1-201ENST00000322310 ZNF556Q9HAH1 456 aa15.3■□□□□ 0.04
SSNA1-201ENST00000322310 ADGRL4Q9HBW9 690 aa15.3■□□□□ 0.04
SSNA1-201ENST00000322310 TAGLN3Q9UI15 199 aa15.3■□□□□ 0.04
SSNA1-201ENST00000322310 IGKV1-9A0A0C4DH69 117 aa15.29■□□□□ 0.04
SSNA1-201ENST00000322310 IGKV1-12A0A0C4DH73 117 aa15.29■□□□□ 0.04
SSNA1-201ENST00000322310 NCBP2LA6PVI3 153 aaKnown RBP15.29■□□□□ 0.04
SSNA1-201ENST00000322310 CCRL2O00421 344 aa15.29■□□□□ 0.04
SSNA1-201ENST00000322310 SERPINA3P01011 423 aa15.29■□□□□ 0.04
SSNA1-201ENST00000322310 IGKV1D-12P01611 117 aa15.29■□□□□ 0.04
SSNA1-201ENST00000322310 ZNF44P15621 663 aa15.29■□□□□ 0.04
SSNA1-201ENST00000322310 MTCP1P56278 107 aa15.29■□□□□ 0.04
SSNA1-201ENST00000322310 MADCAM1Q13477 382 aa15.29■□□□□ 0.04
SSNA1-201ENST00000322310 SSX6Q7RTT6 188 aa15.29■□□□□ 0.04
SSNA1-201ENST00000322310 CATSPERDQ86XM0 798 aa15.29■□□□□ 0.04
SSNA1-201ENST00000322310 C4orf3Q8WVX3 66 aa15.29■□□□□ 0.04
SSNA1-201ENST00000322310 RFT1Q96AA3 541 aa15.29■□□□□ 0.04
SSNA1-201ENST00000322310 TEX12Q9BXU0 123 aa15.29■□□□□ 0.04
SSNA1-201ENST00000322310 ZMAT4Q9H898 229 aa15.29■□□□□ 0.04
SSNA1-201ENST00000322310 SIRT4Q9Y6E7 314 aaPredicted RBP15.29■□□□□ 0.04
SSNA1-201ENST00000322310 KBTBD11-OT1A0A1B0GTJ5 212 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 ZNF670-ZNF695F2Z2N8 137 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 M0R129 80 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 PRKYO43930 277 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 CSN2P05814 226 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 HCKP08631 526 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 RAP2AP10114 183 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 GNG10P50151 68 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 RAB7AP51149 207 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 MS4A2Q01362 244 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 BNIP1Q12981 228 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 OR8H3Q8N146 312 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 YIPF7Q8N8F6 280 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 OR11H1Q8NG94 326 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 GON7Q9BXV9 100 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 FAM107BQ9H098 131 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 ABCG5Q9H222 651 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 PSG11Q9UQ72 335 aa15.28■□□□□ 0.04
SSNA1-201ENST00000322310 IGHV3-72A0A0B4J1Y9 119 aa15.27■□□□□ 0.04
SSNA1-201ENST00000322310 SLC33A1O00400 549 aaPredicted RBP15.27■□□□□ 0.04
SSNA1-201ENST00000322310 ELANEP08246 267 aa15.27■□□□□ 0.04
SSNA1-201ENST00000322310 GLP1RP43220 463 aa15.27■□□□□ 0.04
SSNA1-201ENST00000322310 PDZK1IP1Q13113 114 aa15.27■□□□□ 0.04
SSNA1-201ENST00000322310 LTC4SQ16873 150 aa15.27■□□□□ 0.04
SSNA1-201ENST00000322310 TGIF2LXQ8IUE1 241 aa15.27■□□□□ 0.04
SSNA1-201ENST00000322310 DNAAF1Q8NEP3 725 aa15.27■□□□□ 0.04
SSNA1-201ENST00000322310 RNFT2Q96EX2 444 aa15.27■□□□□ 0.04
SSNA1-201ENST00000322310 ADAT3Q96EY9 351 aaPredicted RBP15.27■□□□□ 0.04
SSNA1-201ENST00000322310 EAF1Q96JC9 268 aaPredicted RBP15.27■□□□□ 0.04
SSNA1-201ENST00000322310 TBX5Q99593 518 aa15.27■□□□□ 0.04
SSNA1-201ENST00000322310 ADI1Q9BV57 179 aa15.27■□□□□ 0.04
SSNA1-201ENST00000322310 COMMD4Q9H0A8 199 aa15.27■□□□□ 0.04
SSNA1-201ENST00000322310 CLN6Q9NWW5 311 aa15.27■□□□□ 0.04
SSNA1-201ENST00000322310 NDE1Q9NXR1 346 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 190.2 ms