RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 NOTCH4Q99466 2003 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 MDFIC2A0A1B0GVS7 189 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 PPP5D1E7EU14 171 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 TERTO14746 1132 aaKnown RBP14.43□□□□□ -0.1
CLIP4-201ENST00000320081 YIF1AO95070 293 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 BCL3P20749 454 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 MDKP21741 143 aaPredicted RBP14.43□□□□□ -0.1
CLIP4-201ENST00000320081 RPS4Y1P22090 263 aaKnown RBP14.43□□□□□ -0.1
CLIP4-201ENST00000320081 DEFA6Q01524 100 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 LPAR5Q9H1C0 372 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 PROCRQ9UNN8 238 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 ATP23Q9Y6H3 246 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 WSB1Q9Y6I7 421 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 ZBTB25P24278 435 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 ZNF154Q13106 437 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 SLC16A13Q7RTY0 426 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 SLC25A42Q86VD7 318 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 BAGE3Q86Y29 109 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 BAGE2Q86Y30 109 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 SARAFQ96BY9 339 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 SLC7A10Q9NS82 523 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 MTCH1Q9NZJ7 389 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 LIPGQ9Y5X9 500 aa14.43□□□□□ -0.1
CLIP4-201ENST00000320081 CSPG4Q6UVK1 2322 aa14.42□□□□□ -0.1
CLIP4-201ENST00000320081 GUCA2BQ16661 112 aa14.42□□□□□ -0.1
CLIP4-201ENST00000320081 PRR27Q6MZM9 219 aa14.42□□□□□ -0.1
CLIP4-201ENST00000320081 TMEM37Q8WXS4 190 aa14.42□□□□□ -0.1
CLIP4-201ENST00000320081 A0A0G2JK05 382 aa14.42□□□□□ -0.1
CLIP4-201ENST00000320081 NKX2-6A6NCS4 301 aa14.42□□□□□ -0.1
CLIP4-201ENST00000320081 CHST1O43916 411 aa14.42□□□□□ -0.1
CLIP4-201ENST00000320081 OR5G3P0C626 314 aa14.42□□□□□ -0.1
CLIP4-201ENST00000320081 LIFP15018 202 aa14.42□□□□□ -0.1
CLIP4-201ENST00000320081 RPP30P78346 268 aaKnown RBP14.42□□□□□ -0.1
CLIP4-201ENST00000320081 ZNF92Q03936 586 aa14.42□□□□□ -0.1
CLIP4-201ENST00000320081 SNAI3Q3KNW1 292 aa14.42□□□□□ -0.1
CLIP4-201ENST00000320081 TBC1D26Q86UD7 250 aa14.42□□□□□ -0.1
CLIP4-201ENST00000320081 GGTLC2Q14390 218 aa14.42□□□□□ -0.1
CLIP4-201ENST00000320081 JMJD6Q6NYC1 403 aaPredicted RBP14.42□□□□□ -0.1
CLIP4-201ENST00000320081 GNPNAT1Q96EK6 184 aaPredicted RBP14.42□□□□□ -0.1
CLIP4-201ENST00000320081 STRAPQ9Y3F4 350 aaKnown RBP14.42□□□□□ -0.1
CLIP4-201ENST00000320081 MUC6Q6W4X9 2439 aa14.42□□□□□ -0.1
CLIP4-201ENST00000320081 FIGNL2A6NMB9 653 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 SLC25A6P12236 298 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 UQCC1Q9NVA1 299 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 CYB5R1Q9UHQ9 305 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 HS3ST3B1Q9Y662 390 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 TMEM218A2RU14 115 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 PPYP01298 95 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 RAB5CP51148 216 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 C1QL2Q7Z5L3 287 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 UHRF2Q96PU4 802 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 OR2D2Q9H210 308 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 PATJQ8NI35 1801 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 ZNF660Q6AZW8 331 aaPredicted RBP14.41□□□□□ -0.1
CLIP4-201ENST00000320081 RAB19A4D1S5 217 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 LRP5LA4QPB2 252 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 C17orf112F2Z3M2 114 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 MRGPRFQ96AM1 343 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 ZNF837Q96EG3 531 aaPredicted RBP14.41□□□□□ -0.1
CLIP4-201ENST00000320081 ACY3Q96HD9 319 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 KCNK17Q96T54 332 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 STARD10Q9Y365 291 aa14.41□□□□□ -0.1
CLIP4-201ENST00000320081 TRBV5-5A0A0J9YX44 114 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 A0A1W2PPE3 182 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 FAM74A7A6NL05 159 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 TSTD3H0UI37 97 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 FGF7P21781 194 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 LPAR6P43657 344 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 MPV17LQ2QL34 196 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 FAM74A3Q4VXF1 159 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 RPS4Y2Q8TD47 263 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 LINC00862A6NCI5 91 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 SELEP16581 610 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 NTF3P20783 257 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 NPBWR1P48145 328 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 RPS11P62280 158 aaKnown RBP eCLIP14.4□□□□□ -0.1
CLIP4-201ENST00000320081 PSG4Q00888 419 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 FLI1Q01543 452 aaPredicted RBP14.4□□□□□ -0.1
CLIP4-201ENST00000320081 LYG1Q8N1E2 194 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 LHFPL5Q8TAF8 219 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 B3GALNT1O75752 331 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 CNIH1O95406 144 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 SSPNQ14714 243 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 NCMAPQ5T1S8 102 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 C19orf48Q6RUI8 117 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 MSI2Q96DH6 328 aaKnown RBP14.4□□□□□ -0.1
CLIP4-201ENST00000320081 GPR137Q96N19 417 aa14.4□□□□□ -0.1
CLIP4-201ENST00000320081 LIN7CQ9NUP9 197 aaKnown RBP14.4□□□□□ -0.1
CLIP4-201ENST00000320081 TRGV8A0A0C4DH27 118 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 A0A1W2PRD5 423 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 A0A1W2PRF3 423 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 A0A1W2PRM7 423 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 PHOX2AO14813 284 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 IGKV3-11P04433 115 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 APELAP0DMC3 54 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 ZP1P60852 638 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 HMGN3Q15651 99 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 KCNIP4Q6PIL6 250 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 ZNF439Q8NDP4 499 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 LFNGQ8NES3 379 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms