RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 THNSL2Q86YJ6 484 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 D2HGDHQ8N465 521 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 OR13H1Q8NG92 308 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 GPR173Q9NS66 373 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 FKBP11Q9NYL4 201 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 PLXNB3Q9ULL4 1909 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 IGLV3-32A0A0A0MS00 114 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 A0A1W2PQF6 199 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 MAP1LC3B2A6NCE7 125 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 NKX2-6A6NCS4 301 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM210A6NLX4 147 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 SEMA4FO95754 770 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 HRASP01112 189 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 FAHP16930 419 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 FOXF1Q12946 379 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 RAB35Q15286 201 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 C1orf194Q5T5A4 169 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 KMT5CQ86Y97 462 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 SFTPA1Q8IWL2 248 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 MRPL41Q8IXM3 137 aaKnown RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 OSR2Q8N2R0 312 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 PARD6GQ9BYG4 376 aaPredicted RBP4.16□□□□□ -1.74
PTPN13-201ENST00000316707 MAP1LC3BQ9GZQ8 125 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 C11orf1Q9H5F2 150 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 GNG13Q9P2W3 67 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 MYOTQ9UBF9 498 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 B3GALT1Q9Y5Z6 326 aa4.16□□□□□ -1.74
PTPN13-201ENST00000316707 IGKV1D-8A0A087WSZ0 117 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 IGKV1D-43A0A0B4J1Z2 117 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 QDPRP09417 244 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 TCN2P20062 427 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 PDLIM4P50479 330 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 FUT6P51993 359 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 PAX5Q02548 391 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM123Q8N131 208 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 NPRL2Q8WTW4 380 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 HIST1H2AAQ96QV6 131 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 EMC6Q9BV81 110 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 RYDENQ9NUL5 291 aaKnown RBP4.15□□□□□ -1.74
PTPN13-201ENST00000316707 KLRF1Q9NZS2 232 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 TIMM9Q9Y5J7 89 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 DOCK3Q8IZD9 2030 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 DNPH1O43598 174 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 THEGLP0DJG4 465 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 PSMB3P49720 205 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 ADIRFQ15847 76 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 ATP6V1FQ16864 119 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 COX19Q49B96 90 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 ABLIM2Q6H8Q1 611 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 PIGTQ969N2 578 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 JSRP1Q96MG2 331 aaPredicted RBP4.15□□□□□ -1.74
PTPN13-201ENST00000316707 WNT2P09544 360 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 SRP14P37108 136 aaKnown RBP4.15□□□□□ -1.74
PTPN13-201ENST00000316707 MDH2P40926 338 aaKnown RBP4.15□□□□□ -1.74
PTPN13-201ENST00000316707 PAFAH1B2P68402 229 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 C4orf17Q53FE4 359 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 GFI1BQ5VTD9 330 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF664Q8N3J9 261 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 CHODLQ9H9P2 273 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 SLC39A9Q9NUM3 307 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 PLEK2Q9NYT0 353 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 B3GAT1Q9P2W7 334 aa4.15□□□□□ -1.74
PTPN13-201ENST00000316707 F5H5K5 113 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 CST7O76096 145 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 PDGFBP01127 241 aaPredicted RBP4.15□□□□□ -1.75
PTPN13-201ENST00000316707 DRD1P21728 446 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 AADACP22760 399 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 MYBPHQ13203 477 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 SPIN3Q5JUX0 258 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 FOXL2NBQ6ZUU3 175 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 RTN4RQ9BZR6 473 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 LOC101059948A0A1B0GTJ6 334 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 B4DGG1 531 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 FAM90A26D6RGX4 464 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 H0Y980 276 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 HNRNPKP61978 463 aaKnown RBP eCLIP4.15□□□□□ -1.75
PTPN13-201ENST00000316707 HIST3H3Q16695 136 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 NMSQ5H8A3 153 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 FAM27BQ5VT28 67 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 CA5BP1Q8WTZ4 195 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 SOX7Q9BT81 388 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 FAAP24Q9BTP7 215 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM106CQ9BVX2 250 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 AQP7P3A6NL99 342 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 H3BML4 177 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 DBHP09172 617 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 FGF5P12034 268 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 PCBD1P61457 104 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 TNFRSF9Q07011 255 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 HERPUD1Q15011 391 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 KIAA0895LQ68EN5 471 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 C1QL2Q7Z5L3 287 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF321PQ8N8H1 164 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 OR52M1Q8NGK5 317 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 C20orf144Q9BQM9 153 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 RPRMQ9NS64 109 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 MYO10Q9HD67 2058 aa4.15□□□□□ -1.75
PTPN13-201ENST00000316707 LNP1A1A4G5 178 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 ZFP92A6NM28 416 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 CD300LBA8K4G0 201 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms