RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 FGL1Q08830 312 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 C21orf62-AS1Q17RA5 79 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 ZNF474Q6S9Z5 364 aaPredicted RBP5.57□□□□□ -1.52
USP47-201ENST00000305481 Q6ZS49 121 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 FAM58AQ8N1B3 248 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 SUMF2Q8NBJ7 301 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 ABHD17AQ96GS6 310 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 RNF126Q9BV68 326 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 SCNM1Q9BWG6 230 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 C14orf166Q9Y224 244 aaKnown RBP5.57□□□□□ -1.52
USP47-201ENST00000305481 ACACAQ13085 2346 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 IGHV1-18A0A0C4DH31 117 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 HS3ST1O14792 307 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 SCTP09683 121 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 ECI1P42126 302 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 ERVK11-1P61568 191 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 ZNF154Q13106 437 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 IL15RAQ13261 267 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 HERPUD1Q15011 391 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 P2RY6Q15077 328 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 ZNF324BQ6AW86 544 aaPredicted RBP5.56□□□□□ -1.52
USP47-201ENST00000305481 Q6P435 159 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 FAM219AQ8IW50 185 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 TOMM40LQ969M1 308 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 DHRS9Q9BPW9 319 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 RTL8AQ9BWD3 113 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 NMES1Q9C002 83 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 UBQLN2Q9UHD9 624 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 NBEAQ8NFP9 2946 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 SMG1Q96Q15 3661 aaKnown RBP5.56□□□□□ -1.52
USP47-201ENST00000305481 RP1L1Q8IWN7 2480 aaPredicted RBP5.56□□□□□ -1.52
USP47-201ENST00000305481 IGKV1-6A0A0C4DH72 117 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 LRP5LA4QPB2 252 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 OR5H1A6NKK0 313 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 LEUTXA8MZ59 168 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 H0YIZ8 118 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 MLNRO43193 412 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 CRYZL1O95825 349 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 IFNA2P01563 188 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 ZNF728P0DKX0 622 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 AADACP22760 399 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 PIGPP57054 158 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 FXYD4P59646 89 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 ATXN7L3Q14CW9 347 aaPredicted RBP5.56□□□□□ -1.52
USP47-201ENST00000305481 SRSF7Q16629 238 aaKnown RBP eCLIP5.56□□□□□ -1.52
USP47-201ENST00000305481 GSG1LQ6UXU4 331 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 BHLHA15Q7RTS1 189 aaPredicted RBP5.56□□□□□ -1.52
USP47-201ENST00000305481 SPACA3Q8IXA5 215 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 COQ8AQ8NI60 647 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 MOB3AQ96BX8 217 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 ADAT1Q9BUB4 502 aaKnown RBP5.56□□□□□ -1.52
USP47-201ENST00000305481 PLK3Q9H4B4 646 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 TINAGQ9UJW2 476 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 FZR1Q9UM11 496 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 SLC25A15Q9Y619 301 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 IGHV2OR16-5A0A0B4J2B6 119 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 LINC00862A6NCI5 91 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 CDIPTO14735 213 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 TSPAN9O75954 239 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 C4BPBP20851 252 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 PSMB6P28072 239 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 HOXC12P31275 282 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 HOXA4Q00056 320 aaPredicted RBP5.56□□□□□ -1.52
USP47-201ENST00000305481 CLLU1Q5K131 121 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 C1orf185Q5T7R7 199 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 Q6ZR03 302 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 C11orf53Q8IXP5 236 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 KCNRGQ8N5I3 272 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 OR11L1Q8NGX0 322 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 MRPL30Q8TCC3 161 aaKnown RBP5.56□□□□□ -1.52
USP47-201ENST00000305481 RDH5Q92781 318 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 NRIP2Q9BQI9 281 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 IFT22Q9H7X7 185 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 CHMP1AQ9HD42 196 aaPredicted RBP5.56□□□□□ -1.52
USP47-201ENST00000305481 COMMD9Q9P000 198 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 MBD2Q9UBB5 411 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 TP53TG5Q9Y2B4 290 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 MAB21L2Q9Y586 359 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 AUP1Q9Y679 476 aa5.56□□□□□ -1.52
USP47-201ENST00000305481 TRBV6-7A0A0A0MS04 114 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 RP2O75695 350 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 CRYABP02511 175 aaKnown RBP5.55□□□□□ -1.52
USP47-201ENST00000305481 HOXB5P09067 269 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 RBMXP38159 391 aaKnown RBP5.55□□□□□ -1.52
USP47-201ENST00000305481 RBM39Q14498 530 aaKnown RBP5.55□□□□□ -1.52
USP47-201ENST00000305481 IL13RA2Q14627 380 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 SP6Q3SY56 376 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 BEX5Q5H9J7 111 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 BEND4Q6ZU67 534 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 LINC00596Q86U02 117 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 LURAP1LQ8IV03 231 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 Q8NA96 180 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 POC1AQ8NBT0 407 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 RRNAD1Q96FB5 475 aaKnown RBP5.55□□□□□ -1.52
USP47-201ENST00000305481 CITED4Q96RK1 184 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 DMRTA2Q96SC8 542 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 GSX2Q9BZM3 304 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 SLC2A9Q9NRM0 540 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 PURGQ9UJV8 347 aaKnown RBP5.55□□□□□ -1.52
USP47-201ENST00000305481 MKRN2OSH3BPM6 223 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms