RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 AMMECR1Q9Y4X0 333 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 NDUFS8O00217 210 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 PPP1R17O96001 155 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 LGALS7P47929 136 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 PGGT1BP53609 377 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 SIM1P81133 766 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 OR8I2Q8N0Y5 310 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 OR2C3Q8N628 320 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 OXGR1Q96P68 337 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 MMP25Q9NPA2 562 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 HSPB8Q9UJY1 196 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 PCOLCE2Q9UKZ9 415 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 ZNF346Q9UL40 294 aaKnown RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 PLAGL1Q9UM63 463 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 SLC17A3O00476 420 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 SH2D1BO14796 132 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 ACTL6AO96019 429 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 ALOX5APP20292 161 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 GLRA1P23415 457 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 HOXD3P31249 432 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 POLR2IP36954 125 aaKnown RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 SSR4P51571 173 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 PLPPR5Q32ZL2 321 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 SAMD13Q5VXD3 122 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 TMEM207Q6UWW9 146 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 LRTM2Q8N967 370 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 PIGTQ969N2 578 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 POM121L2Q96KW2 1035 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 NDUFAF3Q9BU61 184 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 GPR52Q9Y2T5 361 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 ALG1L2C9J202 215 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 TNFSF14O43557 240 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 NEURL1O76050 574 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 SLC25A5P05141 298 aaKnown RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 FLT3LGP49771 235 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 GAB4Q2WGN9 574 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 OR4S1Q8NGB4 309 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 UBE2FQ969M7 185 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 ZNF768Q9H5H4 540 aaKnown RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 PAPPA2Q9BXP8 1791 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 C7orf77A4D0Y5 90 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 SSTR4P31391 388 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 CCR2P41597 374 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 ST3GAL2Q16842 350 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 LY6G5CQ5SRR4 150 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 NCMAPQ5T1S8 102 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 GLIPR1L1Q6UWM5 242 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 FBXL14Q8N1E6 418 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 OR52L2PQ8NGH6 319 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 MS4A10Q96PG2 267 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 PLAC1Q9HBJ0 212 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 SLC7A10Q9NS82 523 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 IL36GQ9NZH8 169 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 THAP10Q9P2Z0 257 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 WASHC3Q9Y3C0 194 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 NCOA6Q14686 2063 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 TRBV11-1A0A0K0K1C0 115 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 ISLRO14498 428 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 PLAUP00749 431 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 MYOGP15173 224 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 ZNF766Q5HY98 468 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 CST9Q5W186 159 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 LIAT1Q6ZQX7 453 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 ZNF383Q8NA42 475 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 LSM10Q969L4 123 aaKnown RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 APOBEC3DQ96AK3 386 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 PRELID3AQ96N28 172 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 SRD5A3Q9H8P0 318 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 MYADML2A6NDP7 307 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 NPIPB6E9PJ23 425 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 H3BMH7 237 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 ADAP1O75689 374 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 CNMDO75829 334 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 PRSS2P07478 247 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 MPLP40238 635 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 ELLP55199 621 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 OR1D5P58170 312 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 C20orf196Q8IYI0 205 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 AGBL5Q8NDL9 886 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 MYOZ3Q8TDC0 251 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 COA4Q9NYJ1 87 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 CES1P1Q9UKY3 287 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 PTGDR2Q9Y5Y4 395 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 TRBV24-1A0A075B6N3 115 aa4.67□□□□□ -1.66
SCN1A-201ENST00000303395 CDC14BO60729 498 aa4.67□□□□□ -1.66
SCN1A-201ENST00000303395 PDCD6O75340 191 aa4.67□□□□□ -1.66
SCN1A-201ENST00000303395 OR2J2O76002 312 aa4.67□□□□□ -1.66
SCN1A-201ENST00000303395 HBZP02008 142 aa4.67□□□□□ -1.66
SCN1A-201ENST00000303395 PRSS1P07477 247 aa4.67□□□□□ -1.66
SCN1A-201ENST00000303395 GPR3P46089 330 aa4.67□□□□□ -1.66
SCN1A-201ENST00000303395 SPEM2Q0P670 501 aa4.67□□□□□ -1.66
SCN1A-201ENST00000303395 SHBQ15464 509 aa4.67□□□□□ -1.66
SCN1A-201ENST00000303395 OR1L4Q8NGR5 311 aa4.67□□□□□ -1.66
SCN1A-201ENST00000303395 SPACA9Q96E40 222 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-201ENST00000303395 SIRT3Q9NTG7 399 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-201ENST00000303395 C7orf71A4D174 169 aa4.67□□□□□ -1.66
SCN1A-201ENST00000303395 IGHMP01871 453 aa4.67□□□□□ -1.66
SCN1A-201ENST00000303395 GRPP07492 148 aa4.67□□□□□ -1.66
SCN1A-201ENST00000303395 DANCRP0C864 163 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms