RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 HERV-K104P61576 105 aa11.29□□□□□ -0.6
RUBCN-202ENST00000296343 NHLH1Q02575 133 aa11.29□□□□□ -0.6
RUBCN-202ENST00000296343 HNF4GQ14541 408 aa11.29□□□□□ -0.6
RUBCN-202ENST00000296343 OR51H1Q8NH63 302 aa11.29□□□□□ -0.6
RUBCN-202ENST00000296343 BCL2L2Q92843 193 aaPredicted RBP11.29□□□□□ -0.6
RUBCN-202ENST00000296343 ZDHHC11Q9H8X9 412 aa11.29□□□□□ -0.6
RUBCN-202ENST00000296343 ZNF286AQ9HBT8 521 aa11.29□□□□□ -0.6
RUBCN-202ENST00000296343 ASF1BQ9NVP2 202 aa11.29□□□□□ -0.6
RUBCN-202ENST00000296343 ZNF724A8MTY0 619 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 HOXC12P31275 282 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 FGL1Q08830 312 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 RBM39Q14498 530 aaKnown RBP11.28□□□□□ -0.6
RUBCN-202ENST00000296343 MPPED2Q15777 294 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 FAM189A2Q15884 450 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 COLCA1Q6ZS62 124 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 RBPMSQ93062 196 aaKnown RBP11.28□□□□□ -0.6
RUBCN-202ENST00000296343 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 C10orf35Q96D05 121 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 LINC00470Q9BZP3 86 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 ZNF107Q9UII5 783 aaPredicted RBP11.28□□□□□ -0.6
RUBCN-202ENST00000296343 KCNMB2Q9Y691 235 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 IGKV1D-13A0A0B4J2D9 117 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 PQLC2LA1A4F0 135 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 SHOXO15266 292 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 IGKV1-13P0DP09 117 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 RRASP10301 218 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 NAT1P18440 290 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 M6PRP20645 277 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 ID4P47928 161 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 TAS2R31P59538 309 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 SNTB1Q13884 538 aaKnown RBP11.28□□□□□ -0.6
RUBCN-202ENST00000296343 TBC1D28Q2M2D7 210 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 ACTBL2Q562R1 376 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 GGNBP1Q5YKI7 109 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 TFAP2EQ6VUC0 442 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 ACOT7LQ6ZUV0 252 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 FAM214BQ7L5A3 538 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 SLC51BQ86UW2 128 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 OR52M1Q8NGK5 317 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 SCARB1Q8WTV0 552 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 CPNE2Q96FN4 548 aaPredicted RBP11.28□□□□□ -0.6
RUBCN-202ENST00000296343 KIRREL1Q96J84 757 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 BCL2L14Q9BZR8 327 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 TAS2R3Q9NYW6 316 aa11.28□□□□□ -0.6
RUBCN-202ENST00000296343 B8ZZF3 427 aa11.27□□□□□ -0.6
RUBCN-202ENST00000296343 LRP3O75074 770 aa11.27□□□□□ -0.6
RUBCN-202ENST00000296343 APOC3P02656 99 aa11.27□□□□□ -0.6
RUBCN-202ENST00000296343 EPHA1P21709 976 aa11.27□□□□□ -0.6
RUBCN-202ENST00000296343 PPP1CBP62140 327 aa11.27□□□□□ -0.6
RUBCN-202ENST00000296343 TUSC1Q2TAM9 212 aa11.27□□□□□ -0.6
RUBCN-202ENST00000296343 PRAMEF6Q5VXH4 476 aa11.27□□□□□ -0.6
RUBCN-202ENST00000296343 PDZD9Q8IXQ8 264 aa11.27□□□□□ -0.6
RUBCN-202ENST00000296343 TP53RKQ96S44 253 aa11.27□□□□□ -0.6
RUBCN-202ENST00000296343 CD8AP01732 235 aa11.27□□□□□ -0.61
RUBCN-202ENST00000296343 GLP1RP43220 463 aa11.27□□□□□ -0.61
RUBCN-202ENST00000296343 KRTAP27-1Q3LI81 207 aa11.27□□□□□ -0.61
RUBCN-202ENST00000296343 WDR86Q86TI4 376 aa11.27□□□□□ -0.61
RUBCN-202ENST00000296343 SUMF2Q8NBJ7 301 aa11.27□□□□□ -0.61
RUBCN-202ENST00000296343 BSCL2Q96G97 398 aaPredicted RBP11.27□□□□□ -0.61
RUBCN-202ENST00000296343 ARPC4-TTLL3A0A0A6YYG9 625 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 DBX1A6NMT0 343 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 PROB1E7EW31 1015 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 HSPA12AO43301 675 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 KIR2DL2P43627 348 aaPredicted RBP11.26□□□□□ -0.61
RUBCN-202ENST00000296343 DHODHQ02127 395 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 TGFBR3Q03167 851 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 OR2B11Q5JQS5 317 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 TMEM185AQ8NFB2 350 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 LHFPL5Q8TAF8 219 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 SPSB4Q96A44 273 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 CCL28Q9NRJ3 127 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 DLL3Q9NYJ7 618 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 ZNF175Q9Y473 711 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 RFNGQ9Y644 331 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 TRAV17A0A0B4J275 112 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 RPL36A-HNRNPH2H7BZ11 118 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 PPYP01298 95 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 PSG7Q13046 419 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 HERPUD1Q15011 391 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 TMEM268Q5VZI3 342 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 RPL7L1Q6DKI1 246 aaKnown RBP11.26□□□□□ -0.61
RUBCN-202ENST00000296343 GAPTQ8N292 157 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 OR6K3Q8NGY3 331 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 OR5P3Q8WZ94 311 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 DHRS9Q9BPW9 319 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 PFDN2Q9UHV9 154 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 RNF150Q9ULK6 438 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 ARFGEF3Q5TH69 2177 aa11.26□□□□□ -0.61
RUBCN-202ENST00000296343 WDR1O75083 606 aa11.25□□□□□ -0.61
RUBCN-202ENST00000296343 NXPH2O95156 264 aa11.25□□□□□ -0.61
RUBCN-202ENST00000296343 ZNF83P51522 516 aa11.25□□□□□ -0.61
RUBCN-202ENST00000296343 FOXC1Q12948 553 aa11.25□□□□□ -0.61
RUBCN-202ENST00000296343 ZNF154Q13106 437 aa11.25□□□□□ -0.61
RUBCN-202ENST00000296343 GTF3AQ92664 365 aaKnown RBP11.25□□□□□ -0.61
RUBCN-202ENST00000296343 GMPPAQ96IJ6 420 aaPredicted RBP11.25□□□□□ -0.61
RUBCN-202ENST00000296343 SCGB3A2Q96PL1 93 aa11.25□□□□□ -0.61
RUBCN-202ENST00000296343 NUDT16L1Q9BRJ7 211 aaKnown RBP11.25□□□□□ -0.61
RUBCN-202ENST00000296343 ADAT1Q9BUB4 502 aaKnown RBP11.25□□□□□ -0.61
RUBCN-202ENST00000296343 OR1A1Q9P1Q5 309 aa11.25□□□□□ -0.61
RUBCN-202ENST00000296343 BCL2L11O43521 198 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms