RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 SLC31A2O15432 143 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 CST8O60676 142 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 EIF3GO75821 320 aaKnown RBP eCLIP3.69□□□□□ -1.82
CD44-202ENST00000278385 HPRT1P00492 218 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 SEMG1P04279 462 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 HLA-DQB2P05538 268 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 FRMD6-AS1P0C7T7 363 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 CDH1P12830 882 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 TNFRSF1BP20333 461 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 RPL12P30050 165 aaKnown RBP3.69□□□□□ -1.82
CD44-202ENST00000278385 GALR1P47211 349 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 HOXA1P49639 335 aaPredicted RBP3.69□□□□□ -1.82
CD44-202ENST00000278385 RAB7AP51149 207 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 RORCP51449 518 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 SUB1P53999 127 aaKnown RBP eCLIP3.69□□□□□ -1.82
CD44-202ENST00000278385 RAB38P57729 211 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 IL5RAQ01344 420 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 CD300CQ08708 224 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 CEACAM21Q3KPI0 293 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 SLC25A35Q3KQZ1 300 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 LINC00242Q5T6M2 205 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 WDR74Q6RFH5 385 aaPredicted RBP3.69□□□□□ -1.82
CD44-202ENST00000278385 SH2D5Q6ZV89 423 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 OLIG3Q7RTU3 272 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 C17orf82Q86X59 251 aaPredicted RBP3.69□□□□□ -1.82
CD44-202ENST00000278385 C10orf107Q8IVU9 208 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 PRR22Q8IZ63 422 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 C9orf106Q8NAJ2 232 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 GATD1Q8NB37 220 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 OR52B6Q8NGF0 335 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 COQ8AQ8NI60 647 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 PCNPQ8WW12 178 aaKnown RBP3.69□□□□□ -1.82
CD44-202ENST00000278385 ARPC1AQ92747 370 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 ZMYND19Q96E35 227 aaPredicted RBP3.69□□□□□ -1.82
CD44-202ENST00000278385 MRAP2Q96G30 205 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 PDXPQ96GD0 296 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 ATXN7L3BQ96GX2 97 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 TMEM80Q96HE8 168 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 COX14Q96I36 57 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 OLFM3Q96PB7 478 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 OR2M4Q96R27 311 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 RARRES2Q99969 163 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 AIF1LQ9BQI0 150 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 C20orf144Q9BQM9 153 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 RIOK2Q9BVS4 552 aaKnown RBP3.69□□□□□ -1.82
CD44-202ENST00000278385 PECRQ9BY49 303 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 MS4A6AQ9H2W1 248 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 OR51J1Q9H342 316 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 UGT1A8Q9HAW9 530 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 ARMC1Q9NVT9 282 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 TAAR2Q9P1P5 351 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 VPS29Q9UBQ0 182 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 KLK11Q9UBX7 282 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 ZNF292O60281 2723 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 NUMA1Q14980 2115 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 COL5A1P20908 1838 aaPredicted RBP3.68□□□□□ -1.82
CD44-202ENST00000278385 NCOR2Q9Y618 2525 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 TGIF2-C20orf24A0A0A6YYL0 155 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 IGHV2OR16-5A0A0B4J2B6 119 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 LOC285095A0A1B0GVY8 99 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 A0A1B0GWB2 263 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 OR6C6A6NF89 314 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 CEACAM18A8MTB9 384 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 BTNL10A8MVZ5 291 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 ZNF878C9JN71 531 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 D6RAR5 112 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 F5H5K5 113 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 TSTD3H0UI37 97 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 TNFRSF11BO00300 401 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 TNFSF12O43508 249 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 ICOSLGO75144 302 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 SUPT3HO75486 399 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 TNFSF15O95150 251 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 VENTXO95231 258 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 SLC25A14O95258 325 aaPredicted RBP3.68□□□□□ -1.82
CD44-202ENST00000278385 CRYZL1O95825 349 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 CLDN1O95832 211 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 NUDT14O95848 222 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 SOD1P00441 154 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 AKR1C4P17516 323 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 USF1P22415 310 aaPredicted RBP3.68□□□□□ -1.82
CD44-202ENST00000278385 F2RP25116 425 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 AK4P27144 223 aaPredicted RBP3.68□□□□□ -1.82
CD44-202ENST00000278385 GPX4P36969 197 aaPredicted RBP3.68□□□□□ -1.82
CD44-202ENST00000278385 CDKN2BP42772 138 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 SRP9P49458 86 aaKnown RBP3.68□□□□□ -1.82
CD44-202ENST00000278385 THBS3P49746 956 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 GSK3BP49841 420 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 GPM6AP51674 278 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 DVL1P1P54792 670 aaPredicted RBP3.68□□□□□ -1.82
CD44-202ENST00000278385 CDKN2DP55273 166 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 AP1S2P56377 157 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 RAB25P57735 213 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 OR12D2P58182 307 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 LINC00205P59089 165 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 DYNLT1P63172 113 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 MS4A2Q01362 244 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 ZNF45Q02386 682 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 EDDM3AQ14507 147 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 IHHQ14623 411 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms