RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 HS3ST1O14792 307 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 ARG1P05089 322 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 HOXB3P14651 431 aaPredicted RBP6.91□□□□□ -1.3
USP3-201ENST00000268049 ZNF124Q15973 351 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 MAJINQ3KP22 176 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 DCXRQ7Z4W1 244 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 SLC22A18ASQ8N1D0 253 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 SLC26A10Q8NG04 563 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 TP53RKQ96S44 253 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 ANKRD12Q6UB98 2062 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 MS4A18H0YCH9 400 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 CD59P13987 128 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 MDH2P40926 338 aaKnown RBP6.91□□□□□ -1.3
USP3-201ENST00000268049 ACAA2P42765 397 aaKnown RBP6.91□□□□□ -1.3
USP3-201ENST00000268049 TAS2R60P59551 318 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 MS4A18Q3C1V0 323 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.91□□□□□ -1.3
USP3-201ENST00000268049 RPL7L1Q6DKI1 246 aaKnown RBP6.91□□□□□ -1.3
USP3-201ENST00000268049 SEH1LQ96EE3 360 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 C1QTNF3Q9BXJ4 246 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 ACTR3CQ9C0K3 210 aaPredicted RBP6.91□□□□□ -1.3
USP3-201ENST00000268049 TXNIPQ9H3M7 391 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 LIN7CQ9NUP9 197 aaKnown RBP6.91□□□□□ -1.3
USP3-201ENST00000268049 PILRAQ9UKJ1 303 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 EXOGQ9Y2C4 368 aaKnown RBP6.91□□□□□ -1.3
USP3-201ENST00000268049 CHST2Q9Y4C5 530 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 NXPH3O95157 252 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 GPANK1O95872 356 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 FBP1P09467 338 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 PPOXP50336 477 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 FUT6P51993 359 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 RAG2P55895 527 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 DOC2BQ14184 412 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 SYPL1Q16563 259 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 GLYATL3Q5SZD4 288 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 OR8G2PQ6IF36 304 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 SLC25A45Q8N413 288 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 FDCSPQ8NFU4 85 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 VSTM2AQ8TAG5 236 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 RPS4Y2Q8TD47 263 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 ADTRPQ96IZ2 230 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 AUNIPQ9H7T9 357 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 COA3Q9Y2R0 106 aaPredicted RBP6.91□□□□□ -1.3
USP3-201ENST00000268049 CROCCQ5TZA2 2017 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 K7ESF4 209 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 PTP4A3O75365 173 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 RECKO95980 971 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 PLP1P60201 277 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 UBE2G1P62253 170 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 PHLDA2Q53GA4 152 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 TRMT12Q53H54 448 aaKnown RBP6.91□□□□□ -1.3
USP3-201ENST00000268049 FAM71E1Q6IPT2 247 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 THNSL2Q86YJ6 484 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 TGIF2LXQ8IUE1 241 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 OR52L2PQ8NGH6 319 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 SMIM4Q8WVI0 70 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 STARD4Q96DR4 205 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 GABARAPL3Q9BY60 117 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 MPC1Q9Y5U8 109 aa6.91□□□□□ -1.3
USP3-201ENST00000268049 LCTP09848 1927 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 MYO16Q9Y6X6 1858 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 HMSDA8MTL9 139 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 SERPINE3A8MV23 424 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 ARPC3O15145 178 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 CST4P01036 141 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 HRASP01112 189 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 GUSBP08236 651 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 MMP15P51511 669 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 RHOBP62745 196 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 PCOLCEQ15113 449 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 LINC00303Q3SY05 128 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 NSUN5P2Q63ZY6 315 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 DPPA3Q6W0C5 159 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 REC114Q7Z4M0 266 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 SYT9Q86SS6 491 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 FUNDC1Q8IVP5 155 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 PRSS33Q8NF86 280 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 ZNF501Q96CX3 271 aaPredicted RBP6.9□□□□□ -1.3
USP3-201ENST00000268049 WDFY2Q96P53 400 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 MARVELD1Q9BSK0 173 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 PBOV1Q9GZY1 135 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 OPN3Q9H1Y3 402 aaPredicted RBP6.9□□□□□ -1.3
USP3-201ENST00000268049 NECAP2Q9NVZ3 263 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 CES1P1Q9UKY3 287 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 CNTRLQ7Z7A1 2325 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 LOC105371267A0A1B0GV96 52 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 MFSD2BA6NFX1 497 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 CDRT15L2A8MXV6 281 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 C1QTNF9BB2RNN3 333 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 SOX15O60248 233 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 C1QTNF9P0C862 333 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 GABRA4P48169 554 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 IGFBP7Q16270 282 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 TMEM97Q5BJF2 176 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 SPATA46Q5T0L3 261 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 LINC00346Q8IVM7 164 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 TMEM251Q8N6I4 163 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 C8orf46Q8TAG6 207 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 LINC01560Q8TB33 94 aa6.9□□□□□ -1.3
USP3-201ENST00000268049 ZNF646O15015 1829 aaPredicted RBP6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms