RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 OR10A7Q8NGE5 316 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 TRAV38-1A0A0B4J264 116 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 A0A1W2PPE3 182 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 UBE2L3P68036 154 aaKnown RBP10.65□□□□□ -0.7
COL8A1-201ENST00000261037 PSG6Q00889 435 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 ZNF770Q6IQ21 691 aaPredicted RBP10.65□□□□□ -0.7
COL8A1-201ENST00000261037 NUFIP2Q7Z417 695 aaKnown RBP10.65□□□□□ -0.7
COL8A1-201ENST00000261037 GAPTQ8N292 157 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 OR6C3Q9NZP0 311 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 TTC3P53804 2025 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 OOEPA6NGQ2 149 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 UQCC3Q6UW78 93 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 KLHDC1Q8N7A1 406 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 OR2Y1Q8NGV0 311 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 RAB1CQ92928 201 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 PIK3IP1Q96FE7 263 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 WDFY2Q96P53 400 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 OR2H1Q9GZK4 316 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 TEX50A0A1B0GTY4 177 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 CEACAM3P40198 252 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 LGALS7P47929 136 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 RAC3P60763 192 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 PMS2P11Q13670 270 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 IL13RA2Q14627 380 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 RNF165Q6ZSG1 346 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 WFDC3Q8IUB2 231 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 SSMEM1Q8WWF3 244 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 RND1Q92730 232 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 SH2D2AQ9NP31 389 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 ANKRD31Q8N7Z5 1873 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 HPXP02790 462 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 SNRPEP62304 92 aaKnown RBP10.65□□□□□ -0.7
COL8A1-201ENST00000261037 SLC23A3Q6PIS1 610 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 DPF1Q92782 380 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 IL22RA2Q969J5 263 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 ABHD1Q96SE0 405 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 SAP30LQ9HAJ7 183 aa10.65□□□□□ -0.7
COL8A1-201ENST00000261037 OR5B21A6NL26 309 aa10.65□□□□□ -0.71
COL8A1-201ENST00000261037 FFAR1O14842 300 aa10.65□□□□□ -0.71
COL8A1-201ENST00000261037 INHBBP09529 407 aa10.65□□□□□ -0.71
COL8A1-201ENST00000261037 TMEM33P57088 247 aa10.65□□□□□ -0.71
COL8A1-201ENST00000261037 CLLU1Q5K131 121 aa10.65□□□□□ -0.71
COL8A1-201ENST00000261037 WDR74Q6RFH5 385 aaPredicted RBP10.65□□□□□ -0.71
COL8A1-201ENST00000261037 PDPNQ86YL7 162 aa10.65□□□□□ -0.71
COL8A1-201ENST00000261037 SPICQ8N5J4 248 aa10.65□□□□□ -0.71
COL8A1-201ENST00000261037 OR52L2PQ8NGH6 319 aa10.65□□□□□ -0.71
COL8A1-201ENST00000261037 CCL28Q9NRJ3 127 aa10.65□□□□□ -0.71
COL8A1-201ENST00000261037 WASHC3Q9Y3C0 194 aa10.65□□□□□ -0.71
COL8A1-201ENST00000261037 LSM11P83369 360 aaKnown RBP eCLIP10.64□□□□□ -0.71
COL8A1-201ENST00000261037 C1orf53Q5VUE5 145 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 PRSS54Q6PEW0 395 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 CLEC18BQ6UXF7 455 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 CD300LDQ6UXZ3 194 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 ADAD2Q8NCV1 583 aaKnown RBP10.64□□□□□ -0.71
COL8A1-201ENST00000261037 OR4S2Q8NH73 311 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 RASL11BQ9BPW5 248 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 OR1K1Q8NGR3 316 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 GPR35Q9HC97 309 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 MPC1Q9Y5U8 109 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 LIPGQ9Y5X9 500 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 VWA1Q6PCB0 445 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 DEGS2Q6QHC5 323 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 LILRB1Q8NHL6 650 aaPredicted RBP10.64□□□□□ -0.71
COL8A1-201ENST00000261037 PTP4A1Q93096 173 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 ASCL3Q9NQ33 180 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 DTX4Q9Y2E6 619 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 COL4A5P29400 1685 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 PEBP1P30086 187 aaKnown RBP10.64□□□□□ -0.71
COL8A1-201ENST00000261037 SPRED2Q7Z698 418 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 NUBPLQ8TB37 319 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 SLC25A40Q8TBP6 338 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 RNF24Q9Y225 148 aa10.64□□□□□ -0.71
COL8A1-201ENST00000261037 DMKNQ6E0U4 476 aaPredicted RBP10.63□□□□□ -0.71
COL8A1-201ENST00000261037 OR4P4Q8NGL7 312 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 SLC35B3Q9H1N7 401 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 SLC52A3Q9NQ40 469 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 MRPS18BQ9Y676 258 aaKnown RBP10.63□□□□□ -0.71
COL8A1-201ENST00000261037 QSER1Q2KHR3 1735 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 CDRT15L2A8MXV6 281 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 CST2P09228 141 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 RPL7P18124 248 aaKnown RBP10.63□□□□□ -0.71
COL8A1-201ENST00000261037 REG1BP48304 166 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 C11orf91Q3C1V1 193 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 GTF2H5Q6ZYL4 71 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 CHST1O43916 411 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 MGPP08493 103 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 SLC6A1P30531 599 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 HOXC8P31273 242 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 RNF212Q495C1 297 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 PRSS42Q7Z5A4 293 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 C9orf40Q8IXQ3 194 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 D2HGDHQ8N465 521 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 OR4C5Q8NGB2 326 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 ATP5SQ99766 215 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 A0A1B0GTQ1 180 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 GABRA1P14867 456 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 HMGA2P52926 109 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 RANP62826 216 aaKnown RBP10.63□□□□□ -0.71
COL8A1-201ENST00000261037 PSG5Q15238 335 aa10.63□□□□□ -0.71
COL8A1-201ENST00000261037 ECSCRQ19T08 205 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms