RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 PPIL3Q9H2H8 161 aaKnown RBP11.66□□□□□ -0.54
CNN1-201ENST00000252456 PRDM13Q9H4Q3 707 aa11.66□□□□□ -0.54
CNN1-201ENST00000252456 FOXJ3Q9UPW0 622 aa11.66□□□□□ -0.54
CNN1-201ENST00000252456 MEX3AA1L020 520 aaKnown RBP11.65□□□□□ -0.54
CNN1-201ENST00000252456 SIRPB1O00241 398 aa11.65□□□□□ -0.54
CNN1-201ENST00000252456 PRTN3P24158 256 aa11.65□□□□□ -0.54
CNN1-201ENST00000252456 MLLT11Q13015 90 aaPredicted RBP11.65□□□□□ -0.54
CNN1-201ENST00000252456 SPCS2Q15005 226 aa11.65□□□□□ -0.54
CNN1-201ENST00000252456 DEFB112Q30KQ8 113 aa11.65□□□□□ -0.54
CNN1-201ENST00000252456 ACSM3Q53FZ2 586 aa11.65□□□□□ -0.54
CNN1-201ENST00000252456 MS4A15Q8N5U1 240 aa11.65□□□□□ -0.54
CNN1-201ENST00000252456 OR51T1Q8NGJ9 327 aa11.65□□□□□ -0.54
CNN1-201ENST00000252456 C19orf24Q9BVV8 132 aa11.65□□□□□ -0.54
CNN1-201ENST00000252456 METTL8Q9H825 291 aaKnown RBP11.65□□□□□ -0.54
CNN1-201ENST00000252456 EXOSC4Q9NPD3 245 aaKnown RBP11.65□□□□□ -0.54
CNN1-201ENST00000252456 ISYNA1Q9NPH2 558 aa11.65□□□□□ -0.54
CNN1-201ENST00000252456 IL36GQ9NZH8 169 aa11.65□□□□□ -0.54
CNN1-201ENST00000252456 CKLFQ9UBR5 152 aa11.65□□□□□ -0.54
CNN1-201ENST00000252456 KIAA2026Q5HYC2 2103 aa11.65□□□□□ -0.54
CNN1-201ENST00000252456 ANK2Q01484 3957 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 SH2D1BO14796 132 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 SLC22A1O15245 554 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 GABRR1P24046 479 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 ERVFRD-1P60508 538 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 GRK1Q15835 563 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 GDPD3Q7L5L3 318 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 TPRX1Q8N7U7 411 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.64□□□□□ -0.55
CNN1-201ENST00000252456 OR5D13Q8NGL4 314 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 UFD1Q92890 307 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 ZNF581Q9P0T4 197 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 A0A0G2JK05 382 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 DNAJC9-AS1A6NH13 148 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 SLC33A1O00400 549 aaPredicted RBP11.64□□□□□ -0.55
CNN1-201ENST00000252456 MAS1P04201 325 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 HSMCR30P0CW71 290 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 CPEP16870 476 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 MAPK3P27361 379 aaPredicted RBP11.64□□□□□ -0.55
CNN1-201ENST00000252456 EDDM3BP56851 147 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 UBA52P62987 128 aaKnown RBP11.64□□□□□ -0.55
CNN1-201ENST00000252456 EDDM3AQ14507 147 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 PIGYQ3MUY2 71 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 TMEM91Q6ZNR0 172 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 PNKDQ8N490 385 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 THRSPQ92748 146 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 DUX5Q96PT3 197 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 JMJD8Q96S16 334 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 MGLLQ99685 303 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 GLS2Q9UI32 602 aa11.64□□□□□ -0.55
CNN1-201ENST00000252456 SF3B6Q9Y3B4 125 aaKnown RBP11.64□□□□□ -0.55
CNN1-201ENST00000252456 A0A0U1RQK1 487 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 A0A1W2PP11 408 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 C17orf98A8MV24 154 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 MGST3O14880 152 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 CSN2P05814 226 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 ZNF44P15621 663 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 ZNF182P17025 639 aaPredicted RBP11.63□□□□□ -0.55
CNN1-201ENST00000252456 ERP29P30040 261 aaKnown RBP11.63□□□□□ -0.55
CNN1-201ENST00000252456 BMXP51813 675 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 RPS25P62851 125 aaKnown RBP11.63□□□□□ -0.55
CNN1-201ENST00000252456 DYNC1I2Q13409 638 aaKnown RBP11.63□□□□□ -0.55
CNN1-201ENST00000252456 IL13RA2Q14627 380 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 RSU1Q15404 277 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 LRRTM1Q86UE6 522 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 CDH26Q8IXH8 852 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 OR4D6Q8NGJ1 314 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 TBC1D15Q8TC07 691 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 TMEM203Q969S6 136 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 COQ2Q96H96 371 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 PPA2Q9H2U2 334 aa11.63□□□□□ -0.55
CNN1-201ENST00000252456 TRAV24A0A0B4J272 114 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 HTR3BO95264 441 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 UCHL1P09936 223 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 ZNF728P0DKX0 622 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 GADD45AP24522 165 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 UBE2E1P51965 193 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 P2RX3P56373 397 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 LSM3P62310 102 aaKnown RBP11.62□□□□□ -0.55
CNN1-201ENST00000252456 MEF2CQ06413 473 aaPredicted RBP11.62□□□□□ -0.55
CNN1-201ENST00000252456 SCN1BQ07699 218 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 SLC9A3R2Q15599 337 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 SSX1Q16384 188 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 NHLRC3Q5JS37 347 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 NCR3LG1Q68D85 454 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 RBMS3Q6XE24 437 aaKnown RBP11.62□□□□□ -0.55
CNN1-201ENST00000252456 JAGN1Q8N5M9 183 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 NKAIN3Q8N8D7 197 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 CHST4Q8NCG5 386 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 FAM216AQ8WUB2 273 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 LINC00312Q9Y6C7 94 aa11.62□□□□□ -0.55
CNN1-201ENST00000252456 A0A1W2PPH5 198 aa11.61□□□□□ -0.55
CNN1-201ENST00000252456 A0A1W2PRD5 423 aa11.61□□□□□ -0.55
CNN1-201ENST00000252456 A0A1W2PRF3 423 aa11.61□□□□□ -0.55
CNN1-201ENST00000252456 A0A1W2PRM7 423 aa11.61□□□□□ -0.55
CNN1-201ENST00000252456 CLDN34H7C241 214 aa11.61□□□□□ -0.55
CNN1-201ENST00000252456 DEGS1O15121 323 aa11.61□□□□□ -0.55
CNN1-201ENST00000252456 NPFFO15130 113 aa11.61□□□□□ -0.55
CNN1-201ENST00000252456 AIREO43918 545 aa11.61□□□□□ -0.55
CNN1-201ENST00000252456 SERPINA2P20848 420 aa11.61□□□□□ -0.55
CNN1-201ENST00000252456 SAA4P35542 130 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms