RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 RHOFQ9HBH0 211 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 RAB18Q9NP72 206 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 BABAM2Q9NXR7 383 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 FBLN5Q9UBX5 448 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 UBE2J1Q9Y385 318 aaPredicted RBP11.5□□□□□ -0.57
GPN3-201ENST00000228827 MEGF8Q7Z7M0 2845 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 FUOMA2VDF0 154 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 H0YJX3 145 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 LALBAP00709 142 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 CD2P06729 351 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 CDK2P24941 298 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 LMO1P25800 156 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 GDNFP39905 211 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 KRBOX4Q5JUW0 171 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 ZNF529Q6P280 563 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 CCBE1Q6UXH8 406 aaPredicted RBP11.49□□□□□ -0.57
GPN3-201ENST00000228827 ZFP41Q8N8Y5 198 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 RPS4Y2Q8TD47 263 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 GGHQ92820 318 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 TMEM106AQ96A25 262 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 CPNE2Q96FN4 548 aaPredicted RBP11.49□□□□□ -0.57
GPN3-201ENST00000228827 CLEC7AQ9BXN2 247 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 PPIL3Q9H2H8 161 aaKnown RBP11.49□□□□□ -0.57
GPN3-201ENST00000228827 GAL3ST2Q9H3Q3 398 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 CHCHD3Q9NX63 227 aaKnown RBP11.49□□□□□ -0.57
GPN3-201ENST00000228827 FOXJ3Q9UPW0 622 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 TCF19Q9Y242 345 aa11.49□□□□□ -0.57
GPN3-201ENST00000228827 PKD1L1Q8TDX9 2849 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 ODAMA1E959 279 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 MEGF11A6BM72 1044 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 VGLL3A8MV65 326 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 OGG1O15527 345 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 GNAO1P09471 354 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 OR3A4PP47883 348 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 MTNR1BP49286 362 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 SLC34A1Q06495 639 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 RSU1Q15404 277 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 LIAT1Q6ZQX7 453 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 ABHD12Q8N2K0 398 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 CHST4Q8NCG5 386 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 OR2T6Q8NHC8 308 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 SMIM19Q96E16 107 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 COQ2Q96H96 371 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 NPFFR1Q9GZQ6 430 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 C8orf4Q9NR00 106 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 ZNF281Q9Y2X9 895 aa11.48□□□□□ -0.57
GPN3-201ENST00000228827 PNMA8CA0A1B0GUJ8 204 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 A6NDX4 124 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 F2RL2O00254 374 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 WIPF1O43516 503 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 XPNPEP2O43895 674 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 CDRT1O95170 752 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 HTR3BO95264 441 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 CAPGP40121 348 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 PTGFRP43088 359 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 KIR2DS4P43632 304 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 EFNB2P52799 333 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 PPP3R1P63098 170 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 ST3GAL4Q11206 333 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 MED21Q13503 144 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 PIGYQ3MUY2 71 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 PAN3Q58A45 887 aaKnown RBP11.47□□□□□ -0.57
GPN3-201ENST00000228827 OGFRL1Q5TC84 451 aaPredicted RBP11.47□□□□□ -0.57
GPN3-201ENST00000228827 MINOS1Q5TGZ0 78 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 C8orf59Q8N0T1 100 aaPredicted RBP11.47□□□□□ -0.57
GPN3-201ENST00000228827 C11orf44Q8N8P7 122 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 PXT1Q8NFP0 134 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 OR4P4Q8NGL7 312 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 CORO2AQ92828 525 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 GHSRQ92847 366 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 TAS2R3Q9NYW6 316 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 ING4Q9UNL4 249 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 MINOS1-NBL1R4GNA1 71 aa11.47□□□□□ -0.57
GPN3-201ENST00000228827 TRAV24A0A0B4J272 114 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 KCNAB3O43448 404 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 TSPAN15O95858 294 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 CSN2P05814 226 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 VSIG10L2P0DP72 767 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 GLP1RP43220 463 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 HABP2Q14520 560 aaPredicted RBP11.46□□□□□ -0.57
GPN3-201ENST00000228827 DDI2Q5TDH0 399 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 ELP2Q6IA86 826 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 LAIR2Q6ISS4 152 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 HEPN1Q6WQI6 88 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 KLHDC1Q8N7A1 406 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 OR4D6Q8NGJ1 314 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 OR52N1Q8NH53 320 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 FAM110DQ8TAY7 271 aaPredicted RBP11.46□□□□□ -0.57
GPN3-201ENST00000228827 MMP27Q9H306 513 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 RANBP3Q9H6Z4 567 aaPredicted RBP11.46□□□□□ -0.57
GPN3-201ENST00000228827 ZNF581Q9P0T4 197 aa11.46□□□□□ -0.57
GPN3-201ENST00000228827 NFYBP25208 207 aa11.45□□□□□ -0.58
GPN3-201ENST00000228827 HTR1DP28221 377 aa11.45□□□□□ -0.58
GPN3-201ENST00000228827 BDKRB2P30411 391 aa11.45□□□□□ -0.58
GPN3-201ENST00000228827 ZNF93P35789 620 aaPredicted RBP11.45□□□□□ -0.58
GPN3-201ENST00000228827 IL13RA2Q14627 380 aa11.45□□□□□ -0.58
GPN3-201ENST00000228827 HERPUD1Q15011 391 aa11.45□□□□□ -0.58
GPN3-201ENST00000228827 DMKNQ6E0U4 476 aaPredicted RBP11.45□□□□□ -0.58
GPN3-201ENST00000228827 OR52W1Q6IF63 320 aa11.45□□□□□ -0.58
GPN3-201ENST00000228827 Q6ZTK2 550 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms