RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 CXCL13O43927 109 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 IGHV3-9P01782 118 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 CDX1P47902 265 aaPredicted RBP13.24□□□□□ -0.29
TGFB1-201ENST00000221930 B3GALT5-AS1P59052 145 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 USF2Q15853 346 aaPredicted RBP13.24□□□□□ -0.29
TGFB1-201ENST00000221930 PHLDA2Q53GA4 152 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 NCMAPQ5T1S8 102 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 GPR137CQ8N3F9 429 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 OR10AD1Q8NGE0 317 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 C10orf35Q96D05 121 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 MALSU1Q96EH3 234 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 RSRP1Q9BUV0 290 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 TMEM38BQ9NVV0 291 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 PLA2G2EQ9NZK7 142 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 FBXL17Q9UF56 701 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 CTSDP07339 412 aaPredicted RBP13.24□□□□□ -0.29
TGFB1-201ENST00000221930 FCGR3AP08637 254 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 FCGR2CP31995 323 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 TMEM33P57088 247 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 PSG4Q00888 419 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 FBXL14Q8N1E6 418 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 SPSB1Q96BD6 273 aa13.24□□□□□ -0.29
TGFB1-201ENST00000221930 NRASP01111 189 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 OR5AC1P0C628 307 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 OTX2P32243 289 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 ZNF92Q03936 586 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 RTL6Q6ICC9 239 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 GGNQ86UU5 652 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 SMIM8Q96KF7 97 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 KIAA1549Q9HCM3 1950 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 RRP8O43159 456 aaKnown RBP13.23□□□□□ -0.29
TGFB1-201ENST00000221930 CA11O75493 328 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 DEDDO75618 318 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 DIRAS3O95661 229 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 PDGFBP01127 241 aaPredicted RBP13.23□□□□□ -0.29
TGFB1-201ENST00000221930 IFNA21P01568 189 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 FOLR3P41439 243 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 CEACAM16Q2WEN9 425 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 WIPI1Q5MNZ9 446 aaPredicted RBP13.23□□□□□ -0.29
TGFB1-201ENST00000221930 NSUN5P2Q63ZY6 315 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 AAED1Q7RTV5 226 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 CCDC54Q8NEL0 328 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 CLCC1Q96S66 551 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 TUBA4BQ9H853 241 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 BCO1Q9HAY6 547 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 NECAP2Q9NVZ3 263 aa13.23□□□□□ -0.29
TGFB1-201ENST00000221930 GAR1Q9NY12 217 aaKnown RBP13.23□□□□□ -0.29
TGFB1-201ENST00000221930 ZNF716A6NP11 495 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 PTBP3O95758 552 aaKnown RBP13.22□□□□□ -0.29
TGFB1-201ENST00000221930 P04436 131 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 CHATP28329 748 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 Q0VFX4 171 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 IL34Q6ZMJ4 242 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 LYZL2Q7Z4W2 148 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 OR5L1Q8NGL2 311 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 RTN4IP1Q8WWV3 396 aaPredicted RBP13.22□□□□□ -0.29
TGFB1-201ENST00000221930 ERGIC1Q969X5 290 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 BSCL2Q96G97 398 aaPredicted RBP13.22□□□□□ -0.29
TGFB1-201ENST00000221930 PRRX2Q99811 253 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 ST3GAL6Q9Y274 331 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 FREM1Q5H8C1 2179 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 ZNF728P0DKX0 622 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 CAV2P51636 162 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 CNN3Q15417 329 aaKnown RBP13.22□□□□□ -0.29
TGFB1-201ENST00000221930 ABCA11PQ4W5N1 156 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 SLC22A25Q6T423 547 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 OR10D3Q8NH80 312 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 ABHD3Q8WU67 409 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 PIGCQ92535 297 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 ZNF845Q96IR2 970 aaPredicted RBP13.22□□□□□ -0.29
TGFB1-201ENST00000221930 FOXB1Q99853 325 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 NRIP2Q9BQI9 281 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 ASCL3Q9NQ33 180 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 SIRT7Q9NRC8 400 aa13.22□□□□□ -0.29
TGFB1-201ENST00000221930 GJE1A6NN92 205 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 C9JQL5 133 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 XRCC2O43543 280 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 CST2P09228 141 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 LINC00614P0C842 121 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 NOVA1P51513 510 aaKnown RBP13.21□□□□□ -0.29
TGFB1-201ENST00000221930 HNF4GQ14541 408 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 TRIM61Q5EBN2 209 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 BEND2Q8NDZ0 799 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 OR11L1Q8NGX0 322 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 NTNG2Q96CW9 530 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 SF3B5Q9BWJ5 86 aaKnown RBP13.21□□□□□ -0.29
TGFB1-201ENST00000221930 DECR2Q9NUI1 292 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 RCC2Q9P258 522 aaKnown RBP13.21□□□□□ -0.29
TGFB1-201ENST00000221930 TUBD1Q9UJT1 453 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 AMDHD2Q9Y303 409 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 OR6C6A6NF89 314 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 IFITM10A6NMD0 228 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 H7C1Q1 480 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 TAAR5O14804 337 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 CST4P01036 141 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 MBPP02686 304 aaPredicted RBP13.21□□□□□ -0.29
TGFB1-201ENST00000221930 CD80P33681 288 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 ECI1P42126 302 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 CLDN15P56746 228 aa13.21□□□□□ -0.29
TGFB1-201ENST00000221930 FAM3AP98173 230 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms