RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 ASCC1Q8N9N2 400 aaKnown RBP12.15□□□□□ -0.46
UPK3A-201ENST00000216211 OR2T6Q8NHC8 308 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 NKX3-1Q99801 234 aaPredicted RBP12.15□□□□□ -0.46
UPK3A-201ENST00000216211 PKIBQ9C010 78 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 RANBP3Q9H6Z4 567 aaPredicted RBP12.15□□□□□ -0.46
UPK3A-201ENST00000216211 RAB18Q9NP72 206 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 SSR3Q9UNL2 185 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 DHRS7CA6NNS2 312 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 C17orf98A8MV24 154 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 F8VVB4 439 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 F8VWA3 439 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 K7N7A8 449 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 KRT8P05787 483 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 CCL1P22362 96 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 SERPINB10P48595 397 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 DLX6P56179 175 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 EDDM3BP56851 147 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 ACTA2P62736 377 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 ACTG2P63267 376 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 UBE2V2Q15819 145 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 CATSPERDQ86XM0 798 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 SLAMF9Q96A28 289 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 PLEKHA1Q9HB21 404 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 SLC7A11Q9UPY5 501 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 A3GALT2U3KPV4 340 aa12.14□□□□□ -0.47
UPK3A-201ENST00000216211 IGKV1-27A0A075B6S5 117 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 A0A0G2JK05 382 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 TRDV1A0A1B0GX56 115 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 METTL15A6NJ78 407 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 FAM90A8PA6NJQ4 464 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 J3QLW9 94 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 OGG1O15527 345 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 SYT7O43581 403 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 ARG1P05089 322 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 CD1AP06126 327 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 CHRM2P08172 466 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 VSIG10L2P0DP72 767 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 ZNF19P17023 458 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 FGF9P31371 208 aaPredicted RBP12.13□□□□□ -0.47
UPK3A-201ENST00000216211 TGFBR1P36897 503 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 RAB13P51153 203 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 OR12D2P58182 307 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 RPS25P62851 125 aaKnown RBP12.13□□□□□ -0.47
UPK3A-201ENST00000216211 C11orf88Q6PI97 169 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 LIAT1Q6ZQX7 453 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 CFHR4Q92496 578 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 C4orf36Q96KX1 117 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 CEP19Q96LK0 163 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 NPFFR1Q9GZQ6 430 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 NXF2Q9GZY0 626 aaKnown RBP12.13□□□□□ -0.47
UPK3A-201ENST00000216211 TXNL4BQ9NX01 149 aaKnown RBP12.13□□□□□ -0.47
UPK3A-201ENST00000216211 MTCH1Q9NZJ7 389 aa12.13□□□□□ -0.47
UPK3A-201ENST00000216211 CCDC59Q9P031 241 aaKnown RBP12.13□□□□□ -0.47
UPK3A-201ENST00000216211 G3V4G9 280 aa12.12□□□□□ -0.47
UPK3A-201ENST00000216211 ZNF737O75373 536 aa12.12□□□□□ -0.47
UPK3A-201ENST00000216211 CELP19835 753 aa12.12□□□□□ -0.47
UPK3A-201ENST00000216211 DYNC1I2Q13409 638 aaKnown RBP12.12□□□□□ -0.47
UPK3A-201ENST00000216211 HABP2Q14520 560 aaPredicted RBP12.12□□□□□ -0.47
UPK3A-201ENST00000216211 TRAM1Q15629 374 aa12.12□□□□□ -0.47
UPK3A-201ENST00000216211 FAM189A2Q15884 450 aa12.12□□□□□ -0.47
UPK3A-201ENST00000216211 CCBE1Q6UXH8 406 aaPredicted RBP12.12□□□□□ -0.47
UPK3A-201ENST00000216211 GDPD3Q7L5L3 318 aa12.12□□□□□ -0.47
UPK3A-201ENST00000216211 KCTD20Q7Z5Y7 419 aa12.12□□□□□ -0.47
UPK3A-201ENST00000216211 ZFP41Q8N8Y5 198 aa12.12□□□□□ -0.47
UPK3A-201ENST00000216211 OR13D1Q8NGV5 346 aa12.12□□□□□ -0.47
UPK3A-201ENST00000216211 SLIRPQ9GZT3 109 aaKnown RBP12.12□□□□□ -0.47
UPK3A-201ENST00000216211 RNF167Q9H6Y7 350 aa12.12□□□□□ -0.47
UPK3A-201ENST00000216211 ZNF702PQ9H963 129 aa12.12□□□□□ -0.47
UPK3A-201ENST00000216211 EXOSC4Q9NPD3 245 aaKnown RBP12.12□□□□□ -0.47
UPK3A-201ENST00000216211 SIRT4Q9Y6E7 314 aaPredicted RBP12.12□□□□□ -0.47
UPK3A-201ENST00000216211 ODF3BA8MYP8 253 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 E9PI62 339 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 GATBO75879 557 aaKnown RBP12.11□□□□□ -0.47
UPK3A-201ENST00000216211 ZNF728P0DKX0 622 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 IGHV1-8P0DP01 117 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 FUT6P51993 359 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 GBX2P52951 348 aaPredicted RBP12.11□□□□□ -0.47
UPK3A-201ENST00000216211 FABP5Q01469 135 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 MRPL28Q13084 256 aaKnown RBP12.11□□□□□ -0.47
UPK3A-201ENST00000216211 EDDM3AQ14507 147 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 CCDC58Q4VC31 144 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 LDLRAD2Q5SZI1 272 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 DMKNQ6E0U4 476 aaPredicted RBP12.11□□□□□ -0.47
UPK3A-201ENST00000216211 SLC25A26Q70HW3 274 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 TCF23Q7RTU1 214 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 TMEM219Q86XT9 240 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 OR8H2Q8N162 312 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 LYG1Q8N1E2 194 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 PRSS35Q8N3Z0 413 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 HAVCR2Q8TDQ0 301 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 BORCS8Q96FH0 119 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 IL36RNQ9UBH0 155 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 TCF19Q9Y242 345 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 GSTK1Q9Y2Q3 226 aa12.11□□□□□ -0.47
UPK3A-201ENST00000216211 TBL2Q9Y4P3 447 aaKnown RBP12.11□□□□□ -0.47
UPK3A-201ENST00000216211 PNMA8CA0A1B0GUJ8 204 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 TMEM82A0PJX8 343 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 SULT1C4O75897 302 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 OPN1MWP04001 364 aa12.1□□□□□ -0.47
UPK3A-201ENST00000216211 OPN1MW2P0DN77 364 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms