RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TM2D1Q9BX74 207 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 RGCCQ9H4X1 137 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 C12orf49Q9H741 205 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 CYTIPO60759 359 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 OR7C1O76099 320 aaPredicted RBP11.34□□□□□ -0.59
CTNS-201ENST00000046640 CST4P01036 141 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 IFNA4P05014 189 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 OR5AC1P0C628 307 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 AWAT1Q58HT5 328 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 TMEM164Q5U3C3 297 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 ADAM5Q6NVV9 412 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 PAPOLGQ9BWT3 736 aaKnown RBP11.34□□□□□ -0.59
CTNS-201ENST00000046640 SMCO4Q9NRQ5 59 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 PCNX2A6NKB5 2137 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 C1orf196B1AJZ1 125 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 CDX4O14627 284 aaPredicted RBP11.34□□□□□ -0.59
CTNS-201ENST00000046640 TXNL1O43396 289 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 NXPH3O95157 252 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 CD59P13987 128 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 DUSP1P28562 367 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 CAMLGP49069 296 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 NHLH2Q02577 135 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 CNN3Q15417 329 aaKnown RBP11.34□□□□□ -0.59
CTNS-201ENST00000046640 ABCA11PQ4W5N1 156 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 SUMF1Q8NBK3 374 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 OR11L1Q8NGX0 322 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 GPHA2Q96T91 129 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 TTTY12Q9BZ98 90 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 ZNF703Q9H7S9 590 aaPredicted RBP11.34□□□□□ -0.59
CTNS-201ENST00000046640 GSN-AS1Q9NRJ2 163 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 ANXA10Q9UJ72 324 aa11.34□□□□□ -0.59
CTNS-201ENST00000046640 M0R296 226 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 DNPH1O43598 174 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 TNFSF15O95150 251 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 CD5P06127 495 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 RD3LP0DJH9 198 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 LYL1P12980 280 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 ZNF44P15621 663 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 ZNF14P17017 642 aaPredicted RBP11.33□□□□□ -0.6
CTNS-201ENST00000046640 LHX2P50458 406 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 EIF5AP63241 154 aaKnown RBP11.33□□□□□ -0.6
CTNS-201ENST00000046640 IL15RAQ13261 267 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 MEX3BQ6ZN04 569 aaKnown RBP11.33□□□□□ -0.6
CTNS-201ENST00000046640 FAM24BQ8N5W8 94 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 HIST1H2BAQ96A08 127 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 SPSB1Q96BD6 273 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 HS3ST6Q96QI5 342 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 FAM173AQ9BQD7 235 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 DEFB127Q9H1M4 99 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 WFDC1Q9HC57 220 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 DNAJB11Q9UBS4 358 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 CACFD1Q9UGQ2 172 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 hCG_38984A0A1B0GV85 526 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 NUDT19A8MXV4 375 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 DEDDO75618 318 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 NGFP01138 241 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 MBPP02686 304 aaPredicted RBP11.33□□□□□ -0.6
CTNS-201ENST00000046640 MMP7P09237 267 aaPredicted RBP11.33□□□□□ -0.6
CTNS-201ENST00000046640 OMGP23515 440 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 DVL1P1P54792 670 aaPredicted RBP11.33□□□□□ -0.6
CTNS-201ENST00000046640 EIF2S3LQ2VIR3 472 aaKnown RBP11.33□□□□□ -0.6
CTNS-201ENST00000046640 SLC22A25Q6T423 547 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 OSR2Q8N2R0 312 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 IL22RA1Q8N6P7 574 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 OR56B2PQ8NGI1 322 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 SPRY4Q9C004 299 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 SLC7A11Q9UPY5 501 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 DMXL1Q9Y485 3027 aa11.33□□□□□ -0.6
CTNS-201ENST00000046640 C7orf77A4D0Y5 90 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 PTAFRP25105 342 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 TMEM268Q5VZI3 342 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 DBX2Q6ZNG2 339 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 TMEM251Q8N6I4 163 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 ZNF611Q8N823 705 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 DMBX1Q8NFW5 382 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 OR52M1Q8NGK5 317 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 ZNF442Q9H7R0 627 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 NIT2Q9NQR4 276 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 IL36RNQ9UBH0 155 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 IGHV3-64DA0A0J9YX35 117 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 A0A1W2PPE2 198 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 JTBO76095 146 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 MT-CO3P00414 261 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 CLDN18P56856 261 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 PCBD1P61457 104 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 FABP9Q0Z7S8 132 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 GUK1Q16774 197 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 TMPRSS7Q7RTY8 843 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 SLAMF9Q96A28 289 aa11.32□□□□□ -0.6
CTNS-201ENST00000046640 MAP1BP46821 2468 aaKnown RBP11.32□□□□□ -0.6
CTNS-201ENST00000046640 CEACAM18A8MTB9 384 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 TAAR5O14804 337 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 NQO2P16083 231 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 GPM6AP51674 278 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 CLINT1Q14677 625 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 TMEM182Q6ZP80 229 aaPredicted RBP11.31□□□□□ -0.6
CTNS-201ENST00000046640 LIPGQ9Y5X9 500 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 SVILO95425 2214 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 GPR37O15354 613 aa11.31□□□□□ -0.6
CTNS-201ENST00000046640 CHATP28329 748 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms