RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 PcolceQ61398 468 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Nol4lQ6DIB4 494 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 CapslQ6P8Y1 208 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Fam234bQ8BYI8 624 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Mrpl48Q8JZS9 211 aaKnown RBP18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 S1pr5Q91X56 400 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Q9CQT6 229 aa18.29■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Frem1Q684R7 2191 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Igkv14-100A0A0G2JG36 117 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Glb1l3A2RSQ1 649 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Rnaset2aC0HKG5 259 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Rnaset2bC0HKG6 259 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Psmd7P26516 321 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 RbpjP31266 526 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Rab22aP35285 194 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gm826Q3UQ74 109 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 GalnsQ571E4 520 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Hs3st6Q5GFD5 342 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Mef2aQ60929 498 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Pou4f3Q63955 338 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 H2-M10.4Q85ZW8 331 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Rgs7bpQ8BQP9 257 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 GmdsQ8K0C9 372 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Nt5mQ8VCE6 220 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 CstadQ9D245 104 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Spsb1Q9D5L7 273 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Nek6Q9ES70 313 aa18.28■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Rpl7a-ps5A0A140T8L3 268 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr178E9Q9T3 319 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 H2-M11F6U8V3 335 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 NrasP08556 189 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Rln1P47932 185 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Kcnn3P58391 732 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Mesp1P97309 243 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Acp5Q05117 327 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gm6760Q0ZNK3 87 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 UevldQ3U1V6 471 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Gm5113Q3UGK8 141 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Orm3Q63805 206 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Lrrc75aQ7TSF4 339 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Sirt7Q8BKJ9 402 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 CebpzosQ8BTE5 80 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Plcxd1Q8CHS4 345 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 DhrsxQ8VBZ0 335 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Klhdc3Q8VEM9 382 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Olfr1201Q8VGF5 307 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Fancd2osQ9D4K4 178 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 HikeshiQ9DD02 197 aa18.27■□□□□ 0.52
Ccdc88a-202ENSMUST00000109477 Lrrc29A0A1B0GQY9 621 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Skint2A7XUX6 400 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Wisp3D3Z5L9 354 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Gm21789J3QMZ1 123 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Gm21870J3QPN2 123 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Gm21883J3QPV3 123 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Vmn2r66K7N6R9 851 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Dusp1P28563 367 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Rasd2P63032 266 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Stx4P70452 298 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Fabp5Q05816 135 aaKnown RBP18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Q3TEI4 1023 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 SprQ64105 261 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Pxdc1Q8JZU6 231 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Obp2aQ8K1H9 176 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Cacul1Q8R0X2 377 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Olfr1489Q8VFQ5 313 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Olfr1451Q8VFX5 310 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 NrarpQ91ZA8 114 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Mcts2Q9CQ21 181 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Mrps14Q9CR88 128 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Lin37Q9D8N6 246 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Dnajb12Q9QYI4 376 aaKnown RBP18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Gm10778A0A087WNP5 499 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 4930563M21RikA0A1L1SUT5 578 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Spaca5A2AE20 160 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Siglec15A7E1W8 342 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Mettl11bB2RXM4 283 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Phlda2O08969 144 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Kcnj1O88335 372 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Gon7P0C8B4 98 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 UbbP0CG49 305 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Polr1dP97304 133 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Cln5Q3UMW8 341 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Olfr1477Q7TQQ7 315 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Zfp3Q8BLB0 497 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Vmn1r233Q8R294 319 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Aqp3Q8R2N1 292 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Gpn1Q8VCE2 372 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Ccdc115Q8VE99 180 aaKnown RBP18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Olfr1038Q8VGS1 319 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Vmn1r51Q8VIC6 319 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Ube2v2Q9D2M8 145 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 1700013G24RikQ9DAC6 286 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Slc2a8Q9JIF3 477 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Dkkl1Q9QZL9 230 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Mmp24Q9R0S2 618 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Sfrp5Q9WU66 314 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Unc119Q9Z2R6 240 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Gm17087V9GXQ2 156 aa18.26■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 Gm14124A2AU83 715 aa18.25■□□□□ 0.51
Ccdc88a-202ENSMUST00000109477 ColqO35348 457 aa18.25■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms