RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Mrgprb2Q3KNA1 338 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Wfdc6aQ3UW55 136 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr3Q60879 313 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 AtraidQ6PGD0 223 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Cacfd1Q8BG21 171 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Slc35e1Q8CD26 409 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 WrbQ8K0D7 174 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Lpcat3Q91V01 487 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Cd209cQ91ZW9 178 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Hsbp1Q9CQZ1 76 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Mrpl28Q9D1B9 257 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 OcstampQ9D611 498 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Znf593Q9DB42 134 aaKnown RBP11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Cx3cr1Q9Z0D9 354 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr122W4VSP0 330 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 D7Ertd443eD2J0Y4 644 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm21981D3Z6Q6 369 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Rabl2E9Q9D5 223 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Rab11fip2G3XA57 512 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gfi1bO70237 330 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Itln1O88310 313 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Znf271P15620 580 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 FblP35550 327 aaKnown RBP11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Ccr1l1P51676 356 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Csnk2a1Q60737 391 aaKnown RBP11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 DdiasQ6NZG4 898 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 BC061237Q6P8I2 184 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Edem2Q8BJT9 577 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Dmrta1Q8CFG4 490 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Vmn1r211Q8R266 298 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Fcrl1Q8R4Y0 343 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr168Q8VF05 312 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr812Q8VG64 310 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Iqcf5Q9DAL7 148 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 SclyQ9JLI6 432 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Ca14Q9WVT6 337 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Angptl4Q9Z1P8 410 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Trbv12-1A0A0B4J1H0 124 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm17655A0A1B0GT13 591 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Hbb-bh2B2RVB7 147 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Ankrd29D3YVV3 309 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Vmn2r82G3UWA2 865 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Fgf4P11403 202 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Ca6P18761 317 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr125Q14AJ9 320 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Tmem104Q3TB48 496 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gpr55Q3UJF0 327 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Fam196aQ3USH1 422 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Slc22a14Q497L9 629 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Mc2rQ64326 296 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 1810024B03RikQ8BWE1 200 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Xkr8Q8C0T0 401 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr1280Q8VGG8 305 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr60Q8VGL4 311 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Dnajb11Q99KV1 358 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Snu13Q9D0T1 128 aaKnown RBP11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Fam219aQ9D772 157 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 SelenofQ9ERR7 162 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Sult1b1Q9QWG7 299 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 SnapinQ9Z266 136 aa11.38□□□□□ -0.59
Nup88-203ENSMUST00000108531 Zfp944E9PUS4 492 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm21818J3KMS6 170 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Rps2P25444 293 aaKnown RBP11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Dusp1P28563 367 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Htr2aP35363 471 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Oprm1P42866 398 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Egr3P43300 387 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Prr27Q3SYJ2 352 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Map3k3Q61084 626 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 OmgQ63912 440 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Atpaf1Q811I0 324 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 NelfaQ8BG30 530 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Faap24Q8BHL6 221 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Tsen54Q8C2A2 525 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 MynnQ99MD8 610 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Sec11cQ9D8V7 192 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 1700020A23RikQ9DA59 131 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Wif1Q9WUA1 379 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Spink14B9EJP9 96 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Mn1D3YWE6 1297 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Vmn1r173E9Q8V7 313 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 1700017D01RikG5E851 209 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm21783J3QM57 227 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Avpr2O88721 371 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Tcn2O88968 430 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 mt-Co3P00416 261 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Amy1P00687 511 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Zfp36l2P23949 484 aaKnown RBP11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 AhsgP29699 345 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm7534Q3UU21 679 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Grb2Q60631 217 aaKnown RBP11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Glra1Q64018 457 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Ntf4Q80VU4 209 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Actrt3Q8BXF8 369 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gpn1Q8VCE2 372 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Tubg2Q8VCK3 451 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr794Q8VF26 320 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Pcdhga3Q91XY5 928 aa11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 NosipQ9D6T0 301 aaKnown RBP11.37□□□□□ -0.59
Nup88-203ENSMUST00000108531 Alkbh7Q9D6Z0 221 aa11.37□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms