RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 PET100P0DJ07 73 aa18.43■□□□□ 0.54
CLN6-224ENST00000638076 GLP1RP43220 463 aa18.43■□□□□ 0.54
CLN6-224ENST00000638076 SNTB1Q13884 538 aaKnown RBP18.43■□□□□ 0.54
CLN6-224ENST00000638076 IAH1Q2TAA2 248 aaPredicted RBP18.43■□□□□ 0.54
CLN6-224ENST00000638076 MOB3AQ96BX8 217 aa18.43■□□□□ 0.54
CLN6-224ENST00000638076 CCDC120Q96HB5 630 aa18.43■□□□□ 0.54
CLN6-224ENST00000638076 NAA60Q9H7X0 242 aa18.43■□□□□ 0.54
CLN6-224ENST00000638076 URB1O60287 2271 aaKnown RBP18.42■□□□□ 0.54
CLN6-224ENST00000638076 A0A1W2PR80 420 aa18.42■□□□□ 0.54
CLN6-224ENST00000638076 SCO1O75880 301 aa18.42■□□□□ 0.54
CLN6-224ENST00000638076 NUP62P37198 522 aaPredicted RBP18.42■□□□□ 0.54
CLN6-224ENST00000638076 TBC1D28Q2M2D7 210 aa18.42■□□□□ 0.54
CLN6-224ENST00000638076 SP6Q3SY56 376 aa18.42■□□□□ 0.54
CLN6-224ENST00000638076 PHLDA2Q53GA4 152 aa18.42■□□□□ 0.54
CLN6-224ENST00000638076 TFAP2EQ6VUC0 442 aa18.42■□□□□ 0.54
CLN6-224ENST00000638076 MYPOPQ86VE0 399 aaPredicted RBP18.42■□□□□ 0.54
CLN6-224ENST00000638076 TRIB1Q96RU8 372 aa18.42■□□□□ 0.54
CLN6-224ENST00000638076 SLC2A9Q9NRM0 540 aa18.42■□□□□ 0.54
CLN6-224ENST00000638076 TMA7Q9Y2S6 64 aaKnown RBP18.42■□□□□ 0.54
CLN6-224ENST00000638076 MED12LQ86YW9 2145 aa18.42■□□□□ 0.54
CLN6-224ENST00000638076 FRYQ5TBA9 3013 aa18.42■□□□□ 0.54
CLN6-224ENST00000638076 HSPB6O14558 160 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 OR5AC1P0C628 307 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 DUSP1P28562 367 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 PAN3Q58A45 887 aaKnown RBP18.41■□□□□ 0.54
CLN6-224ENST00000638076 IGSF11Q5DX21 431 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 IGFL2Q6UWQ7 119 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 FOXRED2Q8IWF2 684 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 OR5T2Q8NGG2 359 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 MRPL24Q96A35 216 aaKnown RBP18.41■□□□□ 0.54
CLN6-224ENST00000638076 LINC00052Q96N35 136 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 GLRX2Q9NS18 164 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 RCC2Q9P258 522 aaKnown RBP18.41■□□□□ 0.54
CLN6-224ENST00000638076 A8MXK9 166 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 PRSS44E7EML9 344 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 CELA3BP08861 270 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 ZP3P21754 424 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 AADACP22760 399 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 IGHV1-2P23083 117 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 MPV17LQ2QL34 196 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 GGNBP1Q5YKI7 109 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 GALNT14Q96FL9 552 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 ZNF488Q96MN9 340 aa18.41■□□□□ 0.54
CLN6-224ENST00000638076 LRP3O75074 770 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 IFNA21P01568 189 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 FGF2P09038 288 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 PRKACAP17612 351 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 CA6P23280 308 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 HERV-K104P61576 105 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 GNG3P63215 75 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 TMEM187Q14656 261 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 ZNF573Q86YE8 665 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 SLC38A6Q8IZM9 456 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 BVESQ8NE79 360 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 STOML3Q8TAV4 291 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 AQP10Q96PS8 301 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 DMXL1Q9Y485 3027 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 A0A1B0GW55 424 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 OR5B21A6NL26 309 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 TPD52L2O43399 206 aaKnown RBP18.4■□□□□ 0.54
CLN6-224ENST00000638076 LYZL6O75951 148 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 DUX4L2P0CJ85 424 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 DUX4L3P0CJ86 424 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 DUX4L4P0CJ87 422 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 DUX4L5P0CJ88 424 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 DUX4L6P0CJ89 424 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 DUX4L7P0CJ90 424 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 ZNF14P17017 642 aaPredicted RBP18.4■□□□□ 0.54
CLN6-224ENST00000638076 UCP3P55916 312 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 TGFBR3Q03167 851 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 HSD17B13Q7Z5P4 300 aaPredicted RBP18.4■□□□□ 0.54
CLN6-224ENST00000638076 CYTL1Q9NRR1 136 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 DUX4Q9UBX2 424 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 CFAP47Q6ZTR5 3102 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 ZFHX4Q86UP3 3567 aa18.4■□□□□ 0.54
CLN6-224ENST00000638076 LGALS8O00214 317 aa18.39■□□□□ 0.53
CLN6-224ENST00000638076 NAPSAO96009 420 aa18.39■□□□□ 0.53
CLN6-224ENST00000638076 PPYP01298 95 aa18.39■□□□□ 0.53
CLN6-224ENST00000638076 C5orf24Q7Z6I8 188 aa18.39■□□□□ 0.53
CLN6-224ENST00000638076 OR11L1Q8NGX0 322 aa18.39■□□□□ 0.53
CLN6-224ENST00000638076 NEK7Q8TDX7 302 aa18.39■□□□□ 0.53
CLN6-224ENST00000638076 BARX1Q9HBU1 254 aaPredicted RBP18.39■□□□□ 0.53
CLN6-224ENST00000638076 Q9N2K0 584 aa18.39■□□□□ 0.53
CLN6-224ENST00000638076 FAM86C1Q9NVL1 165 aa18.39■□□□□ 0.53
CLN6-224ENST00000638076 ZNF318Q5VUA4 2279 aa18.39■□□□□ 0.53
CLN6-224ENST00000638076 TRAV17A0A0B4J275 112 aa18.39■□□□□ 0.53
CLN6-224ENST00000638076 TPT1P13693 172 aaKnown RBP18.39■□□□□ 0.53
CLN6-224ENST00000638076 IDH3GP51553 393 aaPredicted RBP18.39■□□□□ 0.53
CLN6-224ENST00000638076 UBE2NP61088 152 aaKnown RBP18.39■□□□□ 0.53
CLN6-224ENST00000638076 FAM214BQ7L5A3 538 aa18.39■□□□□ 0.53
CLN6-224ENST00000638076 SYT3Q9BQG1 590 aa18.39■□□□□ 0.53
CLN6-224ENST00000638076 SHARPINQ9H0F6 387 aa18.39■□□□□ 0.53
CLN6-224ENST00000638076 NUP50Q9UKX7 468 aa18.39■□□□□ 0.53
CLN6-224ENST00000638076 GLI4P10075 376 aa18.38■□□□□ 0.53
CLN6-224ENST00000638076 TSC22D1Q15714 1073 aa18.38■□□□□ 0.53
CLN6-224ENST00000638076 IGFBP7Q16270 282 aa18.38■□□□□ 0.53
CLN6-224ENST00000638076 DEFB109BQ30KR1 87 aa18.38■□□□□ 0.53
CLN6-224ENST00000638076 Q6ZS49 121 aa18.38■□□□□ 0.53
CLN6-224ENST00000638076 CNTNAP3BQ96NU0 1288 aa18.38■□□□□ 0.53
CLN6-224ENST00000638076 RSRP1Q9BUV0 290 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms