RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 KDM4BO94953 1096 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 TMEM225BP0DP42 221 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 ZNF44P15621 663 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 ERP29P30040 261 aaKnown RBP15.37■□□□□ 0.05
CLN6-221ENST00000637494 KIR2DS4P43632 304 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 P2RX3P56373 397 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 ZSCAN26Q16670 478 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 C2orf68Q2NKX9 166 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 PLA1AQ53H76 456 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 ASPHD2Q6ICH7 369 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 OR52W1Q6IF63 320 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 TPRX1Q8N7U7 411 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 OR4S1Q8NGB4 309 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 OR52N4Q8NGI2 321 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 OR52I1Q8NGK6 324 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 OR5D18Q8NGL1 313 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 NDNFQ8TB73 568 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 RPS4Y2Q8TD47 263 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 SPACA5Q96QH8 159 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 NKX3-1Q99801 234 aaPredicted RBP15.37■□□□□ 0.05
CLN6-221ENST00000637494 MRPS18AQ9NVS2 196 aaKnown RBP15.37■□□□□ 0.05
CLN6-221ENST00000637494 UBE2J1Q9Y385 318 aaPredicted RBP15.37■□□□□ 0.05
CLN6-221ENST00000637494 IRGMA1A4Y4 181 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 VGLL3A8MV65 326 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 ODF3BA8MYP8 253 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 PSPNO60542 156 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 ALX3O95076 343 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 ZFPL1O95159 310 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 OR2H2O95918 312 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 PAX6P26367 422 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 SCN1BQ07699 218 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 SSX2Q16385 188 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 MINOS1Q5TGZ0 78 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 LPCAT4Q643R3 524 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 CHST4Q8NCG5 386 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 CDCA4Q9BXL8 241 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 MINOS1-NBL1R4GNA1 71 aa15.36■□□□□ 0.05
CLN6-221ENST00000637494 CD2P06729 351 aa15.35■□□□□ 0.05
CLN6-221ENST00000637494 RAB3AP20336 220 aa15.35■□□□□ 0.05
CLN6-221ENST00000637494 OR3A1P47881 315 aa15.35■□□□□ 0.05
CLN6-221ENST00000637494 MED21Q13503 144 aa15.35■□□□□ 0.05
CLN6-221ENST00000637494 HERPUD1Q15011 391 aa15.35■□□□□ 0.05
CLN6-221ENST00000637494 KISS1Q15726 138 aa15.35■□□□□ 0.05
CLN6-221ENST00000637494 TMPRSS11AQ6ZMR5 421 aa15.35■□□□□ 0.05
CLN6-221ENST00000637494 PARP16Q8N5Y8 322 aa15.35■□□□□ 0.05
CLN6-221ENST00000637494 GPER1Q99527 375 aa15.35■□□□□ 0.05
CLN6-221ENST00000637494 PDCD1LG2Q9BQ51 273 aa15.35■□□□□ 0.05
CLN6-221ENST00000637494 CLEC7AQ9BXN2 247 aa15.35■□□□□ 0.05
CLN6-221ENST00000637494 TMEM133Q9H2Q1 129 aa15.35■□□□□ 0.05
CLN6-221ENST00000637494 IGHV2-26A0A0B4J1V2 119 aa15.34■□□□□ 0.05
CLN6-221ENST00000637494 IGKV1-12A0A0C4DH73 117 aa15.34■□□□□ 0.05
CLN6-221ENST00000637494 DEGS1O15121 323 aa15.34■□□□□ 0.05
CLN6-221ENST00000637494 WIPF1O43516 503 aa15.34■□□□□ 0.05
CLN6-221ENST00000637494 IGKV1D-12P01611 117 aa15.34■□□□□ 0.05
CLN6-221ENST00000637494 MTNR1BP49286 362 aa15.34■□□□□ 0.05
CLN6-221ENST00000637494 ARHGDIBP52566 201 aa15.34■□□□□ 0.05
CLN6-221ENST00000637494 SLC34A1Q06495 639 aa15.34■□□□□ 0.05
CLN6-221ENST00000637494 IL18R1Q13478 541 aa15.34■□□□□ 0.05
CLN6-221ENST00000637494 ARSJQ5FYB0 599 aaPredicted RBP15.34■□□□□ 0.05
CLN6-221ENST00000637494 ZNF691Q5VV52 312 aa15.34■□□□□ 0.05
CLN6-221ENST00000637494 FGF20Q9NP95 211 aaPredicted RBP15.34■□□□□ 0.05
CLN6-221ENST00000637494 TCF19Q9Y242 345 aa15.34■□□□□ 0.05
CLN6-221ENST00000637494 E9PI62 339 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 F2RL2O00254 374 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 MYL12AP19105 171 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 LMO1P25800 156 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 DCKP27707 260 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 EFNB2P52799 333 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 CCDC58Q4VC31 144 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 RPL22L1Q6P5R6 122 aaKnown RBP15.33■□□□□ 0.04
CLN6-221ENST00000637494 CRIP3Q6Q6R5 217 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 TCF23Q7RTU1 214 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 RTN4RL2Q86UN3 420 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 SATL1Q86VE3 508 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 SETD9Q8NE22 299 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 ZNF596Q8TC21 504 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 PIFOQ8TCI5 191 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 GPR148Q8TDV2 347 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 APH1BQ8WW43 257 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 JAM3Q9BX67 310 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 C8orf4Q9NR00 106 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 CHCHD3Q9NX63 227 aaKnown RBP15.33■□□□□ 0.04
CLN6-221ENST00000637494 TAS2R3Q9NYW6 316 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 SIGLEC9Q9Y336 463 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 HILPDAQ9Y5L2 63 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 MGAM2Q2M2H8 2515 aa15.33■□□□□ 0.04
CLN6-221ENST00000637494 PEX14O75381 377 aa15.32■□□□□ 0.04
CLN6-221ENST00000637494 CSN2P05814 226 aa15.32■□□□□ 0.04
CLN6-221ENST00000637494 CSF1P09603 554 aa15.32■□□□□ 0.04
CLN6-221ENST00000637494 HTR1DP28221 377 aa15.32■□□□□ 0.04
CLN6-221ENST00000637494 RAB13P51153 203 aa15.32■□□□□ 0.04
CLN6-221ENST00000637494 DYNLT3P51808 116 aa15.32■□□□□ 0.04
CLN6-221ENST00000637494 DEFA6Q01524 100 aa15.32■□□□□ 0.04
CLN6-221ENST00000637494 AESQ08117 197 aa15.32■□□□□ 0.04
CLN6-221ENST00000637494 KRBOX4Q5JUW0 171 aa15.32■□□□□ 0.04
CLN6-221ENST00000637494 TTC23Q5W5X9 447 aa15.32■□□□□ 0.04
CLN6-221ENST00000637494 DYNAPQ8N1N2 210 aa15.32■□□□□ 0.04
CLN6-221ENST00000637494 OR4D6Q8NGJ1 314 aa15.32■□□□□ 0.04
CLN6-221ENST00000637494 CYGBQ8WWM9 190 aa15.32■□□□□ 0.04
CLN6-221ENST00000637494 A0A0G2JK05 382 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms