RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 OSR2Q8N2R0 312 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 PNKDQ8N490 385 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 CHST4Q8NCG5 386 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 SLC30A7Q8NEW0 376 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 OR1J1Q8NGS3 322 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 OR2G2Q8NGZ5 317 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 MCFD2Q8NI22 146 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 NPRL2Q8WTW4 380 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 IL1F10Q8WWZ1 152 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 EEF1AKMT3Q96AZ1 226 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 DNAJA3Q96EY1 480 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 CMTM7Q96FZ5 175 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 CAPZA3Q96KX2 299 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 OR2M2Q96R28 347 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 OVOL2Q9BRP0 275 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 EFCAB11Q9BUY7 163 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 RIOK2Q9BVS4 552 aaKnown RBP2.38□□□□□ -2.03
PSPC1-208ENST00000635562 SLC17A9Q9BYT1 436 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 SLC25A39Q9BZJ4 359 aaPredicted RBP2.38□□□□□ -2.03
PSPC1-208ENST00000635562 COA1Q9GZY4 146 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 SHARPINQ9H0F6 387 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 RNF167Q9H6Y7 350 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 EXOSC4Q9NPD3 245 aaKnown RBP2.38□□□□□ -2.03
PSPC1-208ENST00000635562 PLSCR3Q9NRY6 295 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 TAS2R5Q9NYW4 299 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 NUDT4Q9NZJ9 180 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 THYN1Q9P016 225 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 FBXO7Q9Y3I1 522 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 PLXND1Q9Y4D7 1925 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 IFT140Q96RY7 1462 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 ARHGAP35Q9NRY4 1499 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 ARHGAP23Q9P227 1491 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 NEDD4P46934 1319 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 KDM5AP29375 1690 aaKnown RBP2.37□□□□□ -2.03
PSPC1-208ENST00000635562 MAP3K1Q13233 1512 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 RALGAPA1Q6GYQ0 2036 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 SBF1O95248 1867 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 ANKRD26Q9UPS8 1709 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 DICER1Q9UPY3 1922 aaKnown RBP2.37□□□□□ -2.03
PSPC1-208ENST00000635562 ADAMTSL1Q8N6G6 1762 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 IGLV3-22A0A075B6J6 115 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 MEIKINA0A087WXM9 373 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 BORCS7-ASMTA0A0B4J1R7 106 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 IGLV9-49A0A0B4J1Y8 123 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 LOC101059948A0A1B0GTJ6 334 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 FAM240AA0A1B0GVK7 77 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 NKX2-6A6NCS4 301 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 E7EQ34 232 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 H3BSA7 217 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 FCN1O00602 326 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 DEGS1O15121 323 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 TCF21O43680 179 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 EDIL3O43854 480 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF432O94892 652 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 HPRT1P00492 218 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 IFNA17P01571 189 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 PFN1P07737 140 aaKnown RBP2.37□□□□□ -2.03
PSPC1-208ENST00000635562 OR5G3P0C626 314 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 GKN3PP0CG01 181 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 UBBP0CG47 229 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 GNB3P16520 340 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 IL1RNP18510 177 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 USF1P22415 310 aaPredicted RBP2.37□□□□□ -2.03
PSPC1-208ENST00000635562 GPR183P32249 361 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 OPRL1P41146 370 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 SUB1P53999 127 aaKnown RBP eCLIP2.37□□□□□ -2.03
PSPC1-208ENST00000635562 NCALDP61601 193 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 ECH1Q13011 328 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 QPRTQ15274 297 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 TAF9Q16594 264 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 OCIAD2Q56VL3 154 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 TFDP3Q5H9I0 405 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 AKR1C8PQ5T2L2 129 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 ZFAND6Q6FIF0 208 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 NANOGP8Q6NSW7 305 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF613Q6PF04 617 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 XKRXQ6PP77 449 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 ALKAL1Q6UXT8 129 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 APOOLQ6UXV4 268 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 TFAP2EQ6VUC0 442 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 STRADAQ7RTN6 431 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 TMEM150AQ86TG1 271 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 OAFQ86UD1 273 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 CALHM3Q86XJ0 350 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 MUC15Q8N387 334 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 GDPD1Q8N9F7 314 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 OR2K2Q8NGT1 345 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 OR5H6Q8NGV6 325 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 OR51Q1Q8NH59 317 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 ZFAND1Q8TCF1 268 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 SFT2D1Q8WV19 159 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 CANT1Q8WVQ1 401 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 TCTEX1D2Q8WW35 142 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 ARPC1AQ92747 370 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 BORCS7Q96B45 105 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 DCUN1D1Q96GG9 259 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF486Q96H40 463 aaPredicted RBP2.37□□□□□ -2.03
PSPC1-208ENST00000635562 DIRAS2Q96HU8 199 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 PGLYRP3Q96LB9 341 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 BIRC8Q96P09 236 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms