RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.73□□□□□ -0.21
UBE3D-208ENST00000626828 TNFAIP8L1Q8WVP5 186 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 HEXA-AS1Q9H8Q6 139 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 EXOSC4Q9NPD3 245 aaKnown RBP13.73□□□□□ -0.21
UBE3D-208ENST00000626828 IL36RNQ9UBH0 155 aa13.73□□□□□ -0.21
UBE3D-208ENST00000626828 SF3B6Q9Y3B4 125 aaKnown RBP13.73□□□□□ -0.21
UBE3D-208ENST00000626828 TRBV5-7A0A0A0MS05 114 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 RNASEK-C17orf49H0YIS7 233 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 GABRPO00591 440 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 MGST3O14880 152 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 DEGS1O15121 323 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 CRHBPP24387 322 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 SNU13P55769 128 aaKnown RBP13.72□□□□□ -0.21
UBE3D-208ENST00000626828 EDDM3BP56851 147 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 SCN1BQ07699 218 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 RSU1Q15404 277 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 GRK1Q15835 563 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 RBM48Q5RL73 367 aaKnown RBP13.72□□□□□ -0.21
UBE3D-208ENST00000626828 DDI2Q5TDH0 399 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 Q6YL49 198 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 Q8NFD4 153 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 SLC25A28Q96A46 364 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 CNBD2Q96M20 576 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 S100A13Q99584 98 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 PCDHB16Q9NRJ7 776 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 PAK1IP1Q9NWT1 392 aaPredicted RBP13.72□□□□□ -0.21
UBE3D-208ENST00000626828 ING4Q9UNL4 249 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 FOXJ3Q9UPW0 622 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 FAM96BQ9Y3D0 163 aa13.72□□□□□ -0.21
UBE3D-208ENST00000626828 A0A1W2PPK0 400 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 hADV38S2A0JD32 116 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 FUOMA2VDF0 154 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 DNAJC9-AS1A6NH13 148 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 PSPNO60542 156 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 OR2H2O95918 312 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 MAPK3P27361 379 aaPredicted RBP13.71□□□□□ -0.21
UBE3D-208ENST00000626828 ERP29P30040 261 aaKnown RBP13.71□□□□□ -0.21
UBE3D-208ENST00000626828 MED22Q15528 200 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 SLC9A3R2Q15599 337 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 CDH26Q8IXH8 852 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 PIP4P2Q8N4L2 257 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 C11orf42Q8N5U0 333 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 CHST4Q8NCG5 386 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 OR4S1Q8NGB4 309 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 SGCDQ92629 289 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 ORAI1Q96D31 301 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 OR14A2Q96R54 314 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 OR5M11Q96RB7 305 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 METTL9Q9H1A3 318 aa13.71□□□□□ -0.21
UBE3D-208ENST00000626828 LSM2Q9Y333 95 aaKnown RBP13.71□□□□□ -0.21
UBE3D-208ENST00000626828 A0A0G2JK05 382 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 C17orf98A8MV24 154 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 SIRPB1O00241 398 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 NPFFO15130 113 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 ZNF728P0DKX0 622 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 ZNF44P15621 663 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 FSTP19883 344 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 DOC2BQ14184 412 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 ZNF273Q14593 569 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 ACSM3Q53FZ2 586 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 Q6P435 159 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 C16orf87Q6PH81 154 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 UNQ9370/PRO34162Q6UXP9 181 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 PRSS48Q7RTY5 328 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 OR51T1Q8NGJ9 327 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 GCDHQ92947 438 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-208ENST00000626828 C1orf147Q96MC9 270 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-208ENST00000626828 DUX5Q96PT3 197 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 DERL3Q96Q80 235 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 NR1H4Q96RI1 486 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-208ENST00000626828 ZNF184Q99676 751 aaPredicted RBP13.7□□□□□ -0.22
UBE3D-208ENST00000626828 CCDC90BQ9GZT6 254 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 FAM192AQ9GZU8 254 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 CHST6Q9GZX3 395 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 ISYNA1Q9NPH2 558 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 BLOC1S6Q9UL45 172 aa13.7□□□□□ -0.22
UBE3D-208ENST00000626828 TRAV8-7A0A075B6U6 113 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 A0A0U1RQK1 487 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 MDFIC2A0A1B0GVS7 189 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 TMEM89A2RUT3 159 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 MEGF11A6BM72 1044 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 HOXA3O43365 443 aaPredicted RBP13.69□□□□□ -0.22
UBE3D-208ENST00000626828 ZNF780AO75290 641 aaPredicted RBP13.69□□□□□ -0.22
UBE3D-208ENST00000626828 HTR3BO95264 441 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 CSTBP04080 98 aaKnown RBP13.69□□□□□ -0.22
UBE3D-208ENST00000626828 RNASE1P07998 156 aaKnown RBP13.69□□□□□ -0.22
UBE3D-208ENST00000626828 CCL3L1P16619 93 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 OR3A1P47881 315 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 DLX1P56177 255 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 ERVFRD-1P60508 538 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 ACTG1P63261 375 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 PRB3Q04118 309 aaPredicted RBP13.69□□□□□ -0.22
UBE3D-208ENST00000626828 GPR176Q14439 515 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 EDDM3AQ14507 147 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 TMEM86BQ8N661 226 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 Q9H521 79 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 IL36GQ9NZH8 169 aa13.69□□□□□ -0.22
UBE3D-208ENST00000626828 A0A1W2PRD5 423 aa13.68□□□□□ -0.22
UBE3D-208ENST00000626828 A0A1W2PRF3 423 aa13.68□□□□□ -0.22
UBE3D-208ENST00000626828 A0A1W2PRM7 423 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms