RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 LIMS4P0CW20 117 aa13.87□□□□□ -0.19
HMGN3-203ENST00000620514 JUNBP17275 347 aaPredicted RBP13.87□□□□□ -0.19
HMGN3-203ENST00000620514 P2RX3P56373 397 aa13.87□□□□□ -0.19
HMGN3-203ENST00000620514 FAM189A2Q15884 450 aa13.87□□□□□ -0.19
HMGN3-203ENST00000620514 SSX2Q16385 188 aa13.87□□□□□ -0.19
HMGN3-203ENST00000620514 LPCAT4Q643R3 524 aa13.87□□□□□ -0.19
HMGN3-203ENST00000620514 HIST2H2BDQ6DRA6 164 aa13.87□□□□□ -0.19
HMGN3-203ENST00000620514 CCBE1Q6UXH8 406 aaPredicted RBP13.87□□□□□ -0.19
HMGN3-203ENST00000620514 BAIAP2L2Q6UXY1 529 aa13.87□□□□□ -0.19
HMGN3-203ENST00000620514 MYCBPQ99417 103 aaPredicted RBP13.87□□□□□ -0.19
HMGN3-203ENST00000620514 SMPD3Q9NY59 655 aaPredicted RBP13.87□□□□□ -0.19
HMGN3-203ENST00000620514 GLS2Q9UI32 602 aa13.87□□□□□ -0.19
HMGN3-203ENST00000620514 SESN1Q9Y6P5 492 aa13.87□□□□□ -0.19
HMGN3-203ENST00000620514 VGLL3A8MV65 326 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 SH2D1BO14796 132 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 SULT1B1O43704 296 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 CLIC3O95833 236 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 TSPAN15O95858 294 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 HCKP08631 526 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 CCDC159P0C7I6 412 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 TMEM225BP0DP42 221 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 KIR2DS4P43632 304 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 EFNB2P52799 333 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 GBX2P52951 348 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-203ENST00000620514 ZP1P60852 638 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 SCN1BQ07699 218 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 IL18R1Q13478 541 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 KLHL22Q53GT1 634 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 XAF1Q6GPH4 301 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 TRAPPC6BQ86SZ2 158 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 SERPINA12Q8IW75 414 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 PARP16Q8N5Y8 322 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 ZNF555Q8NEP9 628 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 OR4C13Q8NGP0 309 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 CNIH3Q8TBE1 160 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 TSEN15Q8WW01 171 aaKnown RBP13.86□□□□□ -0.19
HMGN3-203ENST00000620514 RGP1Q92546 391 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-203ENST00000620514 FOXRED1Q96CU9 486 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-203ENST00000620514 MALSU1Q96EH3 234 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 NKX3-1Q99801 234 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-203ENST00000620514 COMMD4Q9H0A8 199 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 FGF20Q9NP95 211 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-203ENST00000620514 DHDHQ9UQ10 334 aa13.86□□□□□ -0.19
HMGN3-203ENST00000620514 VWFP04275 2813 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 IGHV2-26A0A0B4J1V2 119 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 ZNF44P15621 663 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 LMO1P25800 156 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 ERP29P30040 261 aaKnown RBP13.85□□□□□ -0.19
HMGN3-203ENST00000620514 GLIPR1P48060 266 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 SOX2P48431 317 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 ETV1P50549 477 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 DEFA6Q01524 100 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 AESQ08117 197 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 MRPL28Q13084 256 aaKnown RBP13.85□□□□□ -0.19
HMGN3-203ENST00000620514 KISS1Q15726 138 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 ZSCAN26Q16670 478 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 PRAMEF5Q5TYX0 476 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 Q6P435 159 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 TMEM219Q86XT9 240 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 SAXO1Q8IYX7 474 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 OR5D14Q8NGL3 314 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 TMEM133Q9H2Q1 129 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 MMP27Q9H306 513 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 RAB18Q9NP72 206 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 ING3Q9NXR8 418 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 FOXJ3Q9UPW0 622 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 TCF19Q9Y242 345 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 UBE2J1Q9Y385 318 aaPredicted RBP13.85□□□□□ -0.19
HMGN3-203ENST00000620514 HILPDAQ9Y5L2 63 aa13.85□□□□□ -0.19
HMGN3-203ENST00000620514 A0A0G2JK05 382 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 A6NDX4 124 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 ALX3O95076 343 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 GDNFP39905 211 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 LRRC36Q1X8D7 754 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 OR2G6Q5TZ20 316 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 ZNF691Q5VV52 312 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 LIAT1Q6ZQX7 453 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 OR51A2Q8NGJ7 313 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 COQ2Q96H96 371 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 RDH12Q96NR8 316 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 JAM3Q9BX67 310 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 CLEC7AQ9BXN2 247 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 NPFFR1Q9GZQ6 430 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 RANBP3Q9H6Z4 567 aaPredicted RBP13.84□□□□□ -0.19
HMGN3-203ENST00000620514 ABCB10Q9NRK6 738 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 TAS2R4Q9NYW5 299 aa13.84□□□□□ -0.19
HMGN3-203ENST00000620514 SIRT4Q9Y6E7 314 aaPredicted RBP13.84□□□□□ -0.19
HMGN3-203ENST00000620514 SLC33A1O00400 549 aaPredicted RBP13.83□□□□□ -0.2
HMGN3-203ENST00000620514 HABP2Q14520 560 aaPredicted RBP13.83□□□□□ -0.2
HMGN3-203ENST00000620514 HERPUD1Q15011 391 aa13.83□□□□□ -0.2
HMGN3-203ENST00000620514 CDK5R1Q15078 307 aa13.83□□□□□ -0.2
HMGN3-203ENST00000620514 ZNF529Q6P280 563 aa13.83□□□□□ -0.2
HMGN3-203ENST00000620514 KLHDC1Q8N7A1 406 aa13.83□□□□□ -0.2
HMGN3-203ENST00000620514 C11orf44Q8N8P7 122 aa13.83□□□□□ -0.2
HMGN3-203ENST00000620514 OR2T6Q8NHC8 308 aa13.83□□□□□ -0.2
HMGN3-203ENST00000620514 FAM110DQ8TAY7 271 aaPredicted RBP13.83□□□□□ -0.2
HMGN3-203ENST00000620514 NDNFQ8TB73 568 aa13.83□□□□□ -0.2
HMGN3-203ENST00000620514 RPS4Y2Q8TD47 263 aa13.83□□□□□ -0.2
HMGN3-203ENST00000620514 STMN2Q93045 179 aa13.83□□□□□ -0.2
HMGN3-203ENST00000620514 ZNF702PQ9H963 129 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms