RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 HINT2Q9BX68 163 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 CMC2Q9NRP2 79 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 SOX21Q9Y651 276 aaPredicted RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 V9GYH0 126 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 GOSR1O95249 250 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 ACAA1P09110 424 aaPredicted RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 MUC1P15941 1255 aaPredicted RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 ZNF793Q6ZN11 406 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 RTN4IP1Q8WWV3 396 aaPredicted RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 PSENENQ9NZ42 101 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 CLN8Q9UBY8 286 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 FTSJ1Q9UET6 329 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 F5P12259 2224 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 TRAV39A0A0B4J263 110 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 TBX6O95947 436 aaPredicted RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 SMIM17P0DL12 118 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 PPP2CBP62714 309 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 SLC35A1P78382 337 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 TNFRSF9Q07011 255 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 ZNF684Q5T5D7 378 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 MED29Q9NX70 200 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 TMEM213A2RRL7 107 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 IGKV1D-16P01601 117 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 CD300EQ496F6 205 aaPredicted RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 ZPLD1Q8TCW7 415 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 IL36AQ9UHA7 158 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 MKRN2OSH3BPM6 223 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 HMGN4O00479 90 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 ZFPL1O95159 310 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 HMGN2P05204 90 aaKnown RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 DUSP3P51452 185 aaPredicted RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 VSTM2AQ8TAG5 236 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 RNASEH2CQ8TDP1 164 aaKnown RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 SH3BGRL3Q9H299 93 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 SLC25A1P53007 311 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 SRSF1Q07955 248 aaKnown RBP eCLIP2.74□□□□□ -1.97
NEB-220ENST00000618972 RAB1CQ92928 201 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 OR2J1Q9GZK6 312 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 PELI2Q9HAT8 420 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 TET3O43151 1660 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 LAMA4Q16363 1823 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 IGHV3-20A0A0C4DH32 117 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 LOC101059948A0A1B0GTJ6 334 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 MGST1P10620 155 aaKnown RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 TGIF2LYQ8IUE0 185 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 SMIM19Q96E16 107 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 DUSP15Q9H1R2 295 aaPredicted RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 MIA3Q5JRA6 1907 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 A0A1W2PPC4 97 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 C4orf51C9J302 202 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 LDLRAD4O15165 306 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 KLF7O75840 302 aaPredicted RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 PSMB2P49721 201 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 PRDX4Q13162 271 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 PMS2P11Q13670 270 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 CEACAM21Q3KPI0 293 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 OR4B1Q8NGF8 309 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 ABHD14AQ9BUJ0 271 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 E9PCH4 1651 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 OR5AS1Q8N127 324 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 MOB4Q9Y3A3 225 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 MUC20Q8N307 709 aaPredicted RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 RNF133Q8WVZ7 376 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 DEFB126Q9BYW3 111 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 ZNF581Q9P0T4 197 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 CD207Q9UJ71 328 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 PHF1O43189 567 aaPredicted RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 RHBDL1O75783 438 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 HNRNPA1P09651 372 aaKnown RBP eCLIP2.74□□□□□ -1.97
NEB-220ENST00000618972 FAM87AP0C7U9 286 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 DANCRP0C864 163 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 ESDP10768 282 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 CSRP2Q16527 193 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 OR4D5Q8NGN0 318 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 MEGF10Q96KG7 1140 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 TMEM126AQ9H061 195 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 S1PR5Q9H228 398 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 CHST8Q9H2A9 424 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 RBKSQ9H477 322 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 NAGKQ9UJ70 344 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 RAET1LQ5VY80 246 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 LINC00346Q8IVM7 164 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 PLPPR1Q8TBJ4 325 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 FAM173AQ9BQD7 235 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 ANKRD10Q9NXR5 420 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 A0A0A6YYC8 382 aaPredicted RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 LRRC30A6NM36 301 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 I3L1I5 382 aaPredicted RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 LYPD3O95274 346 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 MELTFP08582 738 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 KREMEN2Q8NCW0 462 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 OR13C6PQ8NH95 151 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 IRF7Q92985 503 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 SFT2D2O95562 160 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 CISD3P0C7P0 127 aa2.74□□□□□ -1.97
NEB-220ENST00000618972 RCC2Q9P258 522 aaKnown RBP2.74□□□□□ -1.97
NEB-220ENST00000618972 SHISA8B8ZZ34 492 aa2.73□□□□□ -1.97
NEB-220ENST00000618972 RHOBP62745 196 aa2.73□□□□□ -1.97
NEB-220ENST00000618972 SEC11AP67812 179 aa2.73□□□□□ -1.97
NEB-220ENST00000618972 GAGE13Q4V321 117 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms