RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 FOXB1Q99853 325 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 CMSS1Q9BQ75 279 aaKnown RBP12.7□□□□□ -0.38
CDH1-213ENST00000612417 LIME1Q9H400 295 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 ACKR4Q9NPB9 350 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 TIMM10BQ9Y5J6 103 aa12.7□□□□□ -0.38
CDH1-213ENST00000612417 GPR31O00270 319 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 PLATP00750 562 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 IFNA21P01568 189 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 HTR5AP47898 357 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 HOXA1P49639 335 aaPredicted RBP12.69□□□□□ -0.38
CDH1-213ENST00000612417 LHX2P50458 406 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 AKR1C2P52895 323 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 PSG4Q00888 419 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 AKR1C1Q04828 323 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 RELQ04864 619 aaPredicted RBP12.69□□□□□ -0.38
CDH1-213ENST00000612417 OR8B8Q15620 311 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 SULT4A1Q9BR01 284 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 OR2H1Q9GZK4 316 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 WNT5BQ9H1J7 359 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 DEFB127Q9H1M4 99 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 TAF9BQ9HBM6 251 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 PCDHB16Q9NRJ7 776 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 CST4P01036 141 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 RPL12P30050 165 aaKnown RBP12.69□□□□□ -0.38
CDH1-213ENST00000612417 PIGPP57054 158 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 FAM3AP98173 230 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 FOXC1Q12948 553 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 GUCA2BQ16661 112 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 GGNBP1Q5YKI7 109 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 RPL7L1Q6DKI1 246 aaKnown RBP12.69□□□□□ -0.38
CDH1-213ENST00000612417 TMEM200AQ86VY9 491 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 LRTM2Q8N967 370 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 ZFP62Q8NB50 900 aaPredicted RBP12.69□□□□□ -0.38
CDH1-213ENST00000612417 OR10AD1Q8NGE0 317 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 AKR7LQ8NHP1 331 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 POM121Q96HA1 1249 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 SEC11CQ9BY50 192 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 BCO1Q9HAY6 547 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 OR2S2Q9NQN1 319 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 PPP1R14DQ9NXH3 145 aa12.69□□□□□ -0.38
CDH1-213ENST00000612417 IGKV1-12A0A0C4DH73 117 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 K7EPK0 472 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 KLK10O43240 276 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 GATCO43716 136 aaKnown RBP12.68□□□□□ -0.38
CDH1-213ENST00000612417 GFRA3O60609 400 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 IGKV1D-12P01611 117 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 PMELP40967 661 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 SULT1A2P50226 295 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 CAV2P51636 162 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 FUT6P51993 359 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 SRSF3P84103 164 aaKnown RBP12.68□□□□□ -0.38
CDH1-213ENST00000612417 SMCO1Q147U7 214 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 NRN1LQ496H8 165 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 OSR2Q8N2R0 312 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 FAM71E2Q8N5Q1 922 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 MRPL24Q96A35 216 aaKnown RBP12.68□□□□□ -0.38
CDH1-213ENST00000612417 NAA60Q9H7X0 242 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 UQCC1Q9NVA1 299 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 ZNF581Q9P0T4 197 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 KCNIP3Q9Y2W7 256 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 ARID1AO14497 2285 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 SHANK1Q9Y566 2161 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 ZNF850A8MQ14 1090 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 F8W036 122 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 GEMIN2O14893 280 aaKnown RBP12.68□□□□□ -0.38
CDH1-213ENST00000612417 CYTIPO60759 359 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 JTBO76095 146 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 SYNGR4O95473 234 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 ZNF728P0DKX0 622 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 SPINK2P20155 84 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 CLDN18P56856 261 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 BLOC1S1P78537 153 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 PDZK1IP1Q13113 114 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 TMEM187Q14656 261 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 CEACAM16Q2WEN9 425 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 OR2A2Q6IF42 318 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 LDLRAD3Q86YD5 345 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 FAM219AQ8IW50 185 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 ABHD3Q8WU67 409 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 SPSB4Q96A44 273 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 SUCNR1Q9BXA5 334 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 PLEKHA2Q9HB19 425 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 GPR35Q9HC97 309 aa12.68□□□□□ -0.38
CDH1-213ENST00000612417 XRCC2O43543 280 aa12.67□□□□□ -0.38
CDH1-213ENST00000612417 OPRM1P35372 400 aa12.67□□□□□ -0.38
CDH1-213ENST00000612417 UCP3P55916 312 aa12.67□□□□□ -0.38
CDH1-213ENST00000612417 FLI1Q01543 452 aaPredicted RBP12.67□□□□□ -0.38
CDH1-213ENST00000612417 ZNF92Q03936 586 aa12.67□□□□□ -0.38
CDH1-213ENST00000612417 PIGYQ3MUY2 71 aa12.67□□□□□ -0.38
CDH1-213ENST00000612417 DHRS7BQ6IAN0 325 aaPredicted RBP12.67□□□□□ -0.38
CDH1-213ENST00000612417 SPAG16Q8N0X2 631 aa12.67□□□□□ -0.38
CDH1-213ENST00000612417 TMEM45BQ96B21 275 aa12.67□□□□□ -0.38
CDH1-213ENST00000612417 PRRG4Q9BZD6 226 aa12.67□□□□□ -0.38
CDH1-213ENST00000612417 TLNRD1Q9H1K6 362 aa12.67□□□□□ -0.38
CDH1-213ENST00000612417 NDRG3Q9UGV2 375 aa12.67□□□□□ -0.38
CDH1-213ENST00000612417 SLC7A11Q9UPY5 501 aa12.67□□□□□ -0.38
CDH1-213ENST00000612417 AMDHD2Q9Y303 409 aa12.67□□□□□ -0.38
CDH1-213ENST00000612417 FRYQ5TBA9 3013 aa12.67□□□□□ -0.38
CDH1-213ENST00000612417 ZNF816-ZNF321PA0A0X1KG74 233 aa12.66□□□□□ -0.38
CDH1-213ENST00000612417 MMP7P09237 267 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms