RNA–Protein interactions for RNA: ENST00000602173.5

RAB4B-208, Transcript of RAB4B, member RAS oncogene family, human

TSL 3

Gene RAB4B, Length 592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB4B-208	ENST00000602173	TNFAIP8	O95379	198 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	ARG1	P05089	322 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	LIMS3	P0CW19	117 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	LIMS4	P0CW20	117 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	MYL12A	P19105	171 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	KIR3DL2	P43630	455 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	RAB13	P51153	203 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	EDDM3B	P56851	147 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	GABARAPL2	P60520	117 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	GALE	Q14376	348 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	RNLS	Q5VYX0	342 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	ZNF626	Q68DY1	528 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	HIST2H2BD	Q6DRA6	164 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	CCBE1	Q6UXH8	406 aa	Predicted RBP	10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	SLC25A26	Q70HW3	274 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	GDPD3	Q7L5L3	318 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	EGFL6	Q8IUX8	553 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	RDH10	Q8IZV5	341 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	OR8H2	Q8N162	312 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	KLHDC1	Q8N7A1	406 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	C11orf44	Q8N8P7	122 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	C10orf35	Q96D05	121 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	MALSU1	Q96EH3	234 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	SNX22	Q96L94	193 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	CDCA4	Q9BXL8	241 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	CHCHD3	Q9NX63	227 aa	Known RBP	10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	CLEC2D	Q9UHP7	191 aa		10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	TBL2	Q9Y4P3	447 aa	Known RBP	10.1	□□□□□ -0.79
RAB4B-208	ENST00000602173	MRPS14	O60783	128 aa	Known RBP	10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	SERPINA3	P01011	423 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	HTR1A	P08908	422 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	IGHV1-8	P0DP01	117 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	NPBWR2	P48146	333 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	MEF2C	Q06413	473 aa	Predicted RBP	10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	SSX2	Q16385	188 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	KCTD21	Q4G0X4	260 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	TP53I3	Q53FA7	332 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	PLA1A	Q53H76	456 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	PRSS48	Q7RTY5	328 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	KCTD20	Q7Z5Y7	419 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173		Q8N2B8	174 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	NANOGP1	Q8N7R0	232 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	DTX3	Q8N9I9	347 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	DNAAF1	Q8NEP3	725 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	OR52N4	Q8NGI2	321 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	OR13D1	Q8NGV5	346 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	FOXRED1	Q96CU9	486 aa	Predicted RBP	10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	ADAT3	Q96EY9	351 aa	Predicted RBP	10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	BORCS8	Q96FH0	119 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	MRPL48	Q96GC5	212 aa	Known RBP	10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	ZNF714	Q96N38	554 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	MYCBP	Q99417	103 aa	Predicted RBP	10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	ALG8	Q9BVK2	526 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	CCDC90B	Q9GZT6	254 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	ZNF702P	Q9H963	129 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	SERTAD4	Q9NUC0	356 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	IL36RN	Q9UBH0	155 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	GNG8	Q9UK08	70 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	TCF19	Q9Y242	345 aa		10.09	□□□□□ -0.79
RAB4B-208	ENST00000602173	IGKV1-9	A0A0C4DH69	117 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173		A0A0G2JK05	382 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173		A6NDX4	124 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173		J3QLW9	94 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	HAND1	O96004	215 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	MT-ND2	P03891	347 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	OPN1MW	P04001	364 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	UBC	P0CG48	685 aa	Known RBP	10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	OPN1MW2	P0DN77	364 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	OPN1MW3	P0DN78	364 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	VSIG10L2	P0DP72	767 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	ZNF19	P17023	458 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	RBP2	P50120	134 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	OR12D2	P58182	307 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	EDDM3A	Q14507	147 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	IRF3	Q14653	427 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	CNN3	Q15417	329 aa	Known RBP	10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	FAM189A2	Q15884	450 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	TMEM244	Q5VVB8	128 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173		Q8IYB0	196 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	OR2G2	Q8NGZ5	317 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	PP6455	Q8WZ26	134 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	EMG1	Q92979	244 aa	Known RBP	10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	NKX3-1	Q99801	234 aa	Predicted RBP	10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	ISG20L2	Q9H9L3	353 aa	Known RBP	10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	RBFOX1	Q9NWB1	397 aa	Known RBP	10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	FRRS1L	Q9P0K9	344 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	ERGIC3	Q9Y282	383 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	LINC00312	Q9Y6C7	94 aa		10.08	□□□□□ -0.8
RAB4B-208	ENST00000602173	TRBV2	A0A0J9YWF9	115 aa		10.07	□□□□□ -0.8
RAB4B-208	ENST00000602173	hADV38S2	A0JD32	116 aa		10.07	□□□□□ -0.8
RAB4B-208	ENST00000602173	PSPN	O60542	156 aa		10.07	□□□□□ -0.8
RAB4B-208	ENST00000602173	ISG15	P05161	165 aa		10.07	□□□□□ -0.8
RAB4B-208	ENST00000602173	ATF1	P18846	271 aa		10.07	□□□□□ -0.8
RAB4B-208	ENST00000602173	BCL3	P20749	454 aa		10.07	□□□□□ -0.8
RAB4B-208	ENST00000602173	DUSP1	P28562	367 aa		10.07	□□□□□ -0.8
RAB4B-208	ENST00000602173	DYNLT3	P51808	116 aa		10.07	□□□□□ -0.8
RAB4B-208	ENST00000602173	ATP1B3	P54709	279 aa		10.07	□□□□□ -0.8
RAB4B-208	ENST00000602173	NANOS3	P60323	173 aa	Known RBP	10.07	□□□□□ -0.8
RAB4B-208	ENST00000602173	ACTA2	P62736	377 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms