RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 J3QLI3 93 aa16.01■□□□□ 0.15
UPF1-209ENST00000600310 SLC17A2O00624 439 aa16.01■□□□□ 0.15
UPF1-209ENST00000600310 ENSAO43768 121 aaKnown RBP16.01■□□□□ 0.15
UPF1-209ENST00000600310 OR2H2O95918 312 aa16.01■□□□□ 0.15
UPF1-209ENST00000600310 TK1P04183 234 aa16.01■□□□□ 0.15
UPF1-209ENST00000600310 UBBP0CG47 229 aa16.01■□□□□ 0.15
UPF1-209ENST00000600310 NDUFB7P17568 137 aa16.01■□□□□ 0.15
UPF1-209ENST00000600310 CAPZA1P52907 286 aa16.01■□□□□ 0.15
UPF1-209ENST00000600310 CR1LQ2VPA4 569 aa16.01■□□□□ 0.15
UPF1-209ENST00000600310 FAHD2BQ6P2I3 314 aaPredicted RBP16.01■□□□□ 0.15
UPF1-209ENST00000600310 BTNL3Q6UXE8 466 aa16.01■□□□□ 0.15
UPF1-209ENST00000600310 OR13F1Q8NGS4 319 aa16.01■□□□□ 0.15
UPF1-209ENST00000600310 FAHD2AQ96GK7 314 aa16.01■□□□□ 0.15
UPF1-209ENST00000600310 KCTD7Q96MP8 289 aa16.01■□□□□ 0.15
UPF1-209ENST00000600310 NUDT16L1Q9BRJ7 211 aaKnown RBP16.01■□□□□ 0.15
UPF1-209ENST00000600310 DCTN5Q9BTE1 182 aa16.01■□□□□ 0.15
UPF1-209ENST00000600310 PLGRKTQ9HBL7 147 aa16.01■□□□□ 0.15
UPF1-209ENST00000600310 LOC100506127A0A0U1RQW1 187 aa16■□□□□ 0.15
UPF1-209ENST00000600310 DEGS1O15121 323 aa16■□□□□ 0.15
UPF1-209ENST00000600310 TFAP2AP05549 437 aa16■□□□□ 0.15
UPF1-209ENST00000600310 LIPFP07098 398 aa16■□□□□ 0.15
UPF1-209ENST00000600310 ALDH3B2P48448 385 aa16■□□□□ 0.15
UPF1-209ENST00000600310 RBM11P57052 281 aaKnown RBP16■□□□□ 0.15
UPF1-209ENST00000600310 OR10A3P58181 314 aa16■□□□□ 0.15
UPF1-209ENST00000600310 PAX8Q06710 450 aa16■□□□□ 0.15
UPF1-209ENST00000600310 PIGYQ3MUY2 71 aa16■□□□□ 0.15
UPF1-209ENST00000600310 C17orf107Q6ZR85 190 aa16■□□□□ 0.15
UPF1-209ENST00000600310 ASCC1Q8N9N2 400 aaKnown RBP16■□□□□ 0.15
UPF1-209ENST00000600310 CHST4Q8NCG5 386 aa16■□□□□ 0.15
UPF1-209ENST00000600310 LY6G5BQ8NDX9 201 aa16■□□□□ 0.15
UPF1-209ENST00000600310 OR5D13Q8NGL4 314 aa16■□□□□ 0.15
UPF1-209ENST00000600310 C8orf46Q8TAG6 207 aa16■□□□□ 0.15
UPF1-209ENST00000600310 SLC25A28Q96A46 364 aa16■□□□□ 0.15
UPF1-209ENST00000600310 DMRTB1Q96MA1 342 aa16■□□□□ 0.15
UPF1-209ENST00000600310 CENPOQ9BU64 300 aa16■□□□□ 0.15
UPF1-209ENST00000600310 TMPRSS13Q9BYE2 586 aa16■□□□□ 0.15
UPF1-209ENST00000600310 SHARPINQ9H0F6 387 aa16■□□□□ 0.15
UPF1-209ENST00000600310 ST3GAL6Q9Y274 331 aa16■□□□□ 0.15
UPF1-209ENST00000600310 INAFM1C9JVW0 142 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 SIRPB1O00241 398 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 AIREO43918 545 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 PSPNO60542 156 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 ZNF44P15621 663 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 RAB3BP20337 219 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 CFPP27918 469 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 RANBP1P43487 201 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 SCN1BQ07699 218 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 RAB11BQ15907 218 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 LINC00596Q86U02 117 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 TPRA1Q86W33 373 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 OR8H2Q8N162 312 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 TMEM104Q8NE00 496 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 PPP1R35Q8TAP8 253 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 H1FXQ92522 213 aaKnown RBP15.99■□□□□ 0.15
UPF1-209ENST00000600310 RNF167Q9H6Y7 350 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 C7orf69Q9H7B7 122 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 ARHGAP32A7KAX9 2087 aa15.99■□□□□ 0.15
UPF1-209ENST00000600310 TRBV23-1A0A0A0MS06 115 aa15.98■□□□□ 0.15
UPF1-209ENST00000600310 A0A0G2JK05 382 aa15.98■□□□□ 0.15
UPF1-209ENST00000600310 BPNT1O95861 308 aa15.98■□□□□ 0.15
UPF1-209ENST00000600310 VSIG8P0DPA2 414 aa15.98■□□□□ 0.15
UPF1-209ENST00000600310 MGMTP16455 207 aa15.98■□□□□ 0.15
UPF1-209ENST00000600310 GABRR1P24046 479 aa15.98■□□□□ 0.15
UPF1-209ENST00000600310 PDCD1Q15116 288 aa15.98■□□□□ 0.15
UPF1-209ENST00000600310 MPV17LQ2QL34 196 aa15.98■□□□□ 0.15
UPF1-209ENST00000600310 FAM120AOSQ5T036 256 aa15.98■□□□□ 0.15
UPF1-209ENST00000600310 OR4S1Q8NGB4 309 aa15.98■□□□□ 0.15
UPF1-209ENST00000600310 FUNDC2Q9BWH2 189 aa15.98■□□□□ 0.15
UPF1-209ENST00000600310 CST11Q9H112 138 aa15.98■□□□□ 0.15
UPF1-209ENST00000600310 BANF2Q9H503 90 aa15.98■□□□□ 0.15
UPF1-209ENST00000600310 IFT22Q9H7X7 185 aa15.98■□□□□ 0.15
UPF1-209ENST00000600310 IFITM5A6NNB3 132 aa15.97■□□□□ 0.15
UPF1-209ENST00000600310 SLC33A1O00400 549 aaPredicted RBP15.97■□□□□ 0.15
UPF1-209ENST00000600310 GEMIN2O14893 280 aaKnown RBP15.97■□□□□ 0.15
UPF1-209ENST00000600310 CRTAPO75718 401 aaPredicted RBP15.97■□□□□ 0.15
UPF1-209ENST00000600310 PPIAL4GP0DN37 164 aa15.97■□□□□ 0.15
UPF1-209ENST00000600310 OR3A1P47881 315 aa15.97■□□□□ 0.15
UPF1-209ENST00000600310 QRFPP83859 136 aa15.97■□□□□ 0.15
UPF1-209ENST00000600310 P2RY14Q15391 338 aa15.97■□□□□ 0.15
UPF1-209ENST00000600310 GRK1Q15835 563 aa15.97■□□□□ 0.15
UPF1-209ENST00000600310 NR2C2APQ86WQ0 139 aa15.97■□□□□ 0.15
UPF1-209ENST00000600310 KCNG3Q8TAE7 436 aa15.97■□□□□ 0.15
UPF1-209ENST00000600310 MRI1Q9BV20 369 aa15.97■□□□□ 0.15
UPF1-209ENST00000600310 CHST6Q9GZX3 395 aa15.97■□□□□ 0.15
UPF1-209ENST00000600310 STEAP1Q9UHE8 339 aa15.97■□□□□ 0.15
UPF1-209ENST00000600310 OPN4Q9UHM6 478 aa15.97■□□□□ 0.15
UPF1-209ENST00000600310 DOCK11Q5JSL3 2073 aa15.97■□□□□ 0.15
UPF1-209ENST00000600310 HIVEP2P31629 2446 aa15.97■□□□□ 0.15
UPF1-209ENST00000600310 TRAV24A0A0B4J272 114 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 NOTOA8MTQ0 251 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 TMEM14DPA8MWL7 114 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 MGST3O14880 152 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 OR7C1O76099 320 aaPredicted RBP15.96■□□□□ 0.15
UPF1-209ENST00000600310 AVPP01185 164 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 CSN2P05814 226 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 ARSBP15848 533 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 SDC2P34741 201 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 TAF9Q16594 264 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 HES5Q5TA89 166 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 OR10K2Q6IF99 312 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms