RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 FAM230AA0A1W2PPH8 454 aa16.8■□□□□ 0.28
ARHGEF1-218ENST00000599589 EFNA2O43921 213 aa16.8■□□□□ 0.28
ARHGEF1-218ENST00000599589 HSPB1P04792 205 aaKnown RBP16.8■□□□□ 0.28
ARHGEF1-218ENST00000599589 ZNF133P52736 654 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF1-218ENST00000599589 RSPO4Q2I0M5 234 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF1-218ENST00000599589 ZNF506Q5JVG8 444 aa16.8■□□□□ 0.28
ARHGEF1-218ENST00000599589 SPEM1Q8N4L4 309 aa16.8■□□□□ 0.28
ARHGEF1-218ENST00000599589 MVB12AQ96EY5 273 aa16.8■□□□□ 0.28
ARHGEF1-218ENST00000599589 Q96M66 194 aa16.8■□□□□ 0.28
ARHGEF1-218ENST00000599589 HIST1H2BLQ99880 126 aa16.8■□□□□ 0.28
ARHGEF1-218ENST00000599589 VSTM2BA6NLU5 285 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 PIAS2O75928 621 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 TAF9Q16594 264 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 SLC35E3Q7Z769 313 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 HAS2Q92819 552 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 NCOA6Q14686 2063 aaPredicted RBP16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 A0A1W2PNV4 684 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 SMCO3A2RU48 225 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 PGA5P0DJD9 388 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 CHAF1BQ13112 559 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 MYBPHQ13203 477 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 ZNF385CQ66K41 422 aaPredicted RBP16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 SLC25A47Q6Q0C1 308 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 SNX22Q96L94 193 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 LURAP1Q96LR2 239 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 C2orf88Q9BSF0 95 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 TCFL5Q9UL49 500 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 PIGLQ9Y2B2 252 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 SPEGQ15772 3267 aa16.79■□□□□ 0.28
ARHGEF1-218ENST00000599589 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 FAM221AA4D161 298 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 F5H5K5 113 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 PITX3O75364 302 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 RPL23AP62750 156 aaKnown RBP16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 HLA-DRB3P79483 266 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 BRICD5Q6PL45 260 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 SLC22A25Q6T423 547 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 C20orf196Q8IYI0 205 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 C1orf87Q8N0U7 546 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 CLDND2Q8NHS1 167 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 THAP3Q8WTV1 239 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 NKX2-6A6NCS4 301 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 PHOX2AO14813 284 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 ANGPTL7O43827 346 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 FOXL2P58012 376 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 GRB2P62993 217 aaKnown RBP16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 RUNX1Q01196 453 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 SP5Q6BEB4 398 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 LANCL3Q6ZV70 420 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 D2HGDHQ8N465 521 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 OR5R1Q8NH85 324 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 TP53RKQ96S44 253 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 C11orf1Q9H5F2 150 aa16.78■□□□□ 0.28
ARHGEF1-218ENST00000599589 DHRS3O75911 302 aa16.77■□□□□ 0.28
ARHGEF1-218ENST00000599589 FUT3P21217 361 aa16.77■□□□□ 0.28
ARHGEF1-218ENST00000599589 OR1D5P58170 312 aa16.77■□□□□ 0.28
ARHGEF1-218ENST00000599589 SPCS3P61009 180 aa16.77■□□□□ 0.28
ARHGEF1-218ENST00000599589 OR5C1Q8NGR4 320 aa16.77■□□□□ 0.28
ARHGEF1-218ENST00000599589 ZNF160Q9HCG1 818 aa16.77■□□□□ 0.28
ARHGEF1-218ENST00000599589 IGHV3-20A0A0C4DH32 117 aa16.77■□□□□ 0.27
ARHGEF1-218ENST00000599589 HSPA12AO43301 675 aa16.77■□□□□ 0.27
ARHGEF1-218ENST00000599589 FOSL2P15408 326 aa16.77■□□□□ 0.27
ARHGEF1-218ENST00000599589 PAX1P15863 534 aa16.77■□□□□ 0.27
ARHGEF1-218ENST00000599589 ARL4DP49703 201 aa16.77■□□□□ 0.27
ARHGEF1-218ENST00000599589 C17orf67Q0P5P2 114 aa16.77■□□□□ 0.27
ARHGEF1-218ENST00000599589 USF2Q15853 346 aaPredicted RBP16.77■□□□□ 0.27
ARHGEF1-218ENST00000599589 CARFQ8N187 725 aa16.77■□□□□ 0.27
ARHGEF1-218ENST00000599589 MAGT1Q9H0U3 335 aa16.77■□□□□ 0.27
ARHGEF1-218ENST00000599589 GLRX2Q9NS18 164 aa16.77■□□□□ 0.27
ARHGEF1-218ENST00000599589 C9J4A7 227 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 SSSCA1O60232 199 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 SNRPCP09234 159 aaKnown RBP16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 FOLR1P15328 257 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 EPHA1P21709 976 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 MDKP21741 143 aaPredicted RBP16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 SHISA6Q6ZSJ9 500 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 TGIF2LXQ8IUE1 241 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 PLPP5Q8NEB5 264 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 DNASE2BQ8WZ79 361 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 SYT3Q9BQG1 590 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 V9GYS6 101 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 SHANK1Q9Y566 2161 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 IGHV1OR21-1A0A087WYE8 117 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 A0A087WZY1 265 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 ZNF814B7Z6K7 855 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 MKRN2OSH3BPM6 223 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 SPRY1O43609 319 aaPredicted RBP16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 TRAF3IP2O43734 574 aaPredicted RBP16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 CST7O76096 145 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 IGLV3-1P01715 115 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 BTF3P20290 206 aaKnown RBP16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 EIF3IQ13347 325 aaKnown RBP16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 TMEM217Q8N7C4 229 aa16.76■□□□□ 0.27
ARHGEF1-218ENST00000599589 A0A1W2PNR3 127 aa16.75■□□□□ 0.27
ARHGEF1-218ENST00000599589 PROB1E7EW31 1015 aa16.75■□□□□ 0.27
ARHGEF1-218ENST00000599589 H3BMH7 237 aa16.75■□□□□ 0.27
ARHGEF1-218ENST00000599589 GEMIN2O14893 280 aaKnown RBP16.75■□□□□ 0.27
ARHGEF1-218ENST00000599589 CD200P41217 278 aa16.75■□□□□ 0.27
ARHGEF1-218ENST00000599589 NKX2-1P43699 371 aaPredicted RBP16.75■□□□□ 0.27
ARHGEF1-218ENST00000599589 DYNLT3P51808 116 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms