RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TPRA1Q86W33 373 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 LURAP1LQ8IV03 231 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 OSR2Q8N2R0 312 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 ZNF561Q8N587 486 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 FAM89BQ8N5H3 189 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 OR8B3Q8NGG8 313 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 C8orf46Q8TAG6 207 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 RAB39BQ96DA2 213 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 MED30Q96HR3 178 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 Q96M66 194 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 KCTD7Q96MP8 289 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 OR8B2Q96RD0 313 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 DCTN5Q9BTE1 182 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 SSBP3Q9BWW4 388 aaPredicted RBP8.73□□□□□ -1.01
LIG1-210ENST00000596332 BARHL1Q9BZE3 327 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 BANF2Q9H503 90 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 EXOSC4Q9NPD3 245 aaKnown RBP8.73□□□□□ -1.01
LIG1-210ENST00000596332 FBLN5Q9UBX5 448 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 CLN8Q9UBY8 286 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 OR14J1Q9UGF5 321 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 PCDHB10Q9UN67 800 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 INSIG2Q9Y5U4 225 aa8.73□□□□□ -1.01
LIG1-210ENST00000596332 FN1P02751 2386 aaKnown RBP8.73□□□□□ -1.01
LIG1-210ENST00000596332 CYB5AP00167 134 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 HEXAP06865 529 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 CGB3P0DN86 165 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 CGB7P0DN87 165 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 MMP9P14780 707 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 MGMTP16455 207 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 SERPINA2P20848 420 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 NPY4RP50391 375 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 EFNB2P52799 333 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 SNU13P55769 128 aaKnown RBP8.72□□□□□ -1.01
LIG1-210ENST00000596332 DLX6P56179 175 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 TMEM50BP56557 158 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 VBP1P61758 197 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 IL13RA2Q14627 380 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 P2RY14Q15391 338 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 RSU1Q15404 277 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 TAF9Q16594 264 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 HES5Q5TA89 166 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 AWAT2Q6E213 333 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 Q6ZPA2 131 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 SLC36A1Q7Z2H8 476 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 Q8N7P7 452 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 OR6M1Q8NGM8 313 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 RAB40AQ8WXH6 277 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 TMEM186Q96B77 213 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 FAM3DQ96BQ1 224 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 COQ2Q96H96 371 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 SNX22Q96L94 193 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 NICN1Q9BSH3 213 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 TM2D1Q9BX74 207 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 FAM192AQ9GZU8 254 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 FAM234AQ9H0X4 552 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 RBM38Q9H0Z9 239 aaKnown RBP8.72□□□□□ -1.01
LIG1-210ENST00000596332 LPAR5Q9H1C0 372 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 HIF1ANQ9NWT6 349 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 RCC2Q9P258 522 aaKnown RBP8.72□□□□□ -1.01
LIG1-210ENST00000596332 GHRLQ9UBU3 117 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 OR5V1Q9UGF6 321 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 STEAP1Q9UHE8 339 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 RPUSD1Q9UJJ7 312 aaKnown RBP8.72□□□□□ -1.01
LIG1-210ENST00000596332 ST3GAL6Q9Y274 331 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 CEPT1Q9Y6K0 416 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 NF1P21359 2839 aa8.72□□□□□ -1.01
LIG1-210ENST00000596332 LOC105371242A0A075B767 164 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 TRAV20A0A0B4J274 112 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 IGHV2-70DA0A0C4DH43 119 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 TMEM272A0A1B0GTI8 110 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 NOTOA8MTQ0 251 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 AIPO00170 330 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 SIRPB1O00241 398 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 NDUFB3O43676 98 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 ZNF780AO75290 641 aaPredicted RBP8.71□□□□□ -1.02
LIG1-210ENST00000596332 FOXH1O75593 365 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 BPNT1O95861 308 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 FSHBP01225 129 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 GTF2F2P13984 249 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 ERVFRD-1P60508 538 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 GNB2P62879 340 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 RPS27AP62979 156 aaKnown RBP8.71□□□□□ -1.02
LIG1-210ENST00000596332 MXD1Q05195 221 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 BLMHQ13867 455 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 TUSC1Q2TAM9 212 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 C11orf91Q3C1V1 193 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 ESCO2Q56NI9 601 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 TMEM200BQ69YZ2 307 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 BRICD5Q6PL45 260 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 CLEC9AQ6UXN8 241 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 PNLDC1Q8NA58 520 aaKnown RBP8.71□□□□□ -1.02
LIG1-210ENST00000596332 PLPPR1Q8TBJ4 325 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 FAM46BQ96A09 425 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 MRPS24Q96EL2 167 aaKnown RBP8.71□□□□□ -1.02
LIG1-210ENST00000596332 CPNE2Q96FN4 548 aaPredicted RBP8.71□□□□□ -1.02
LIG1-210ENST00000596332 SIRPDQ9H106 197 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 SLITRK2Q9H156 845 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 VCX3AQ9NNX9 186 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 C19orf12Q9NSK7 152 aa8.71□□□□□ -1.02
LIG1-210ENST00000596332 SLC25A10Q9UBX3 287 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms