RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 OR2H2O95918 312 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 IL13RA2Q14627 380 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 WDR25Q64LD2 544 aaPredicted RBP18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 SLC25A46Q96AG3 418 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 BCL7BQ9BQE9 202 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 SELENOIQ9C0D9 397 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 FBLN5Q9UBX5 448 aa18.73■□□□□ 0.59
SNRNP70-204ENST00000595231 ABCA1O95477 2261 aa18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 KIAA1324LA8MWY0 1029 aaPredicted RBP18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 PSPNO60542 156 aa18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 CD99P14209 185 aa18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 PLA2G7Q13093 441 aa18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 TAF9Q16594 264 aa18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 ESCO2Q56NI9 601 aa18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 METAP1DQ6UB28 335 aaPredicted RBP18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 C17orf107Q6ZR85 190 aa18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 ISOC1Q96CN7 298 aa18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 MSI2Q96DH6 328 aaKnown RBP18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 Q96M66 194 aa18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 SSBP3Q9BWW4 388 aaPredicted RBP18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 SHARPINQ9H0F6 387 aa18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 CLN8Q9UBY8 286 aa18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 GLS2Q9UI32 602 aa18.72■□□□□ 0.59
SNRNP70-204ENST00000595231 TMEM82A0PJX8 343 aa18.71■□□□□ 0.59
SNRNP70-204ENST00000595231 A8MXK9 166 aa18.71■□□□□ 0.59
SNRNP70-204ENST00000595231 MPIG6BO95866 241 aa18.71■□□□□ 0.59
SNRNP70-204ENST00000595231 NPY4RP50391 375 aa18.71■□□□□ 0.59
SNRNP70-204ENST00000595231 GNB2P62879 340 aa18.71■□□□□ 0.59
SNRNP70-204ENST00000595231 SCN1BQ07699 218 aa18.71■□□□□ 0.59
SNRNP70-204ENST00000595231 SPCS2Q15005 226 aa18.71■□□□□ 0.59
SNRNP70-204ENST00000595231 USP43Q70EL4 1123 aa18.71■□□□□ 0.59
SNRNP70-204ENST00000595231 OR2W3Q7Z3T1 314 aa18.71■□□□□ 0.59
SNRNP70-204ENST00000595231 BARHL1Q9BZE3 327 aa18.71■□□□□ 0.59
SNRNP70-204ENST00000595231 DCSTAMPQ9H295 470 aa18.71■□□□□ 0.59
SNRNP70-204ENST00000595231 OR5V1Q9UGF6 321 aa18.71■□□□□ 0.59
SNRNP70-204ENST00000595231 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.71■□□□□ 0.582e-13■■■■□ 23.5
SNRNP70-204ENST00000595231 CSPG4Q6UVK1 2322 aa18.71■□□□□ 0.58
SNRNP70-204ENST00000595231 TMEM272A0A1B0GTI8 110 aa18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 K7N7A8 449 aa18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 SIRPB1O00241 398 aa18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 DEGS1O15121 323 aa18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 NDUFB3O43676 98 aa18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 TK1P04183 234 aa18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 INHBBP09529 407 aa18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 RANBP1P43487 201 aa18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 RPS27AP62979 156 aaKnown RBP18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 KRTAP1-1Q07627 177 aa18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 TMEM59Q9BXS4 323 aa18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 IFT22Q9H7X7 185 aa18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 SLC25A10Q9UBX3 287 aaPredicted RBP18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 POLR3KQ9Y2Y1 108 aaPredicted RBP18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 SVEP1Q4LDE5 3571 aa18.7■□□□□ 0.58
SNRNP70-204ENST00000595231 B4DSR2 109 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 H3BMQ9 156 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 SLC33A1O00400 549 aaPredicted RBP18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 FOSL1P15407 271 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 ZNF44P15621 663 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 LCN2P80188 198 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 LRRC10Q5BKY1 277 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 IDNKQ5T6J7 187 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 LINC00596Q86U02 117 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 CROCCP3Q8IVE0 287 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 ASCC1Q8N9N2 400 aaKnown RBP18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 TMEM185AQ8NFB2 350 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 SNX22Q96L94 193 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 TM2D1Q9BX74 207 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 FAM234AQ9H0X4 552 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 LPAR2Q9HBW0 351 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 TRAV24A0A0B4J272 114 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 PAHP00439 452 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 SNRPBP14678 240 aaKnown RBP18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 GZMKP49863 264 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 MPV17LQ2QL34 196 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 LINC01356Q8N9X3 169 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 CHST4Q8NCG5 386 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 NICN1Q9BSH3 213 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 LPAR5Q9H1C0 372 aa18.69■□□□□ 0.58
SNRNP70-204ENST00000595231 FOXH1O75593 365 aa18.68■□□□□ 0.58
SNRNP70-204ENST00000595231 OR7C1O76099 320 aaPredicted RBP18.68■□□□□ 0.58
SNRNP70-204ENST00000595231 MSMBP08118 114 aa18.68■□□□□ 0.58
SNRNP70-204ENST00000595231 EFNB2P52799 333 aa18.68■□□□□ 0.58
SNRNP70-204ENST00000595231 PAX2Q02962 417 aa18.68■□□□□ 0.58
SNRNP70-204ENST00000595231 SIGIRRQ6IA17 410 aa18.68■□□□□ 0.58
SNRNP70-204ENST00000595231 OR4S1Q8NGB4 309 aa18.68■□□□□ 0.58
SNRNP70-204ENST00000595231 ST8SIA4Q92187 359 aa18.68■□□□□ 0.58
SNRNP70-204ENST00000595231 POM121Q96HA1 1249 aa18.68■□□□□ 0.58
SNRNP70-204ENST00000595231 SMR3AQ99954 134 aa18.68■□□□□ 0.58
SNRNP70-204ENST00000595231 CHST6Q9GZX3 395 aa18.68■□□□□ 0.58
SNRNP70-204ENST00000595231 A0A0A6YYD4 124 aa18.67■□□□□ 0.58
SNRNP70-204ENST00000595231 FAM90A10PA6NDY2 464 aa18.67■□□□□ 0.58
SNRNP70-204ENST00000595231 FAM90A18PA6NE21 464 aa18.67■□□□□ 0.58
SNRNP70-204ENST00000595231 FAM90A16PA6NEW6 464 aa18.67■□□□□ 0.58
SNRNP70-204ENST00000595231 FAM90A20PA6NIJ5 464 aa18.67■□□□□ 0.58
SNRNP70-204ENST00000595231 FAM90A8PA6NJQ4 464 aa18.67■□□□□ 0.58
SNRNP70-204ENST00000595231 FAM90A7PA6NKC0 464 aa18.67■□□□□ 0.58
SNRNP70-204ENST00000595231 FAM90A22PA8MWA6 464 aa18.67■□□□□ 0.58
SNRNP70-204ENST00000595231 FAM90A12PA8MX19 464 aa18.67■□□□□ 0.58
SNRNP70-204ENST00000595231 FAM90A5PA8MXJ8 464 aa18.67■□□□□ 0.58
SNRNP70-204ENST00000595231 FAM90A23PA8MXZ1 464 aa18.67■□□□□ 0.58
SNRNP70-204ENST00000595231 GPR37O15354 613 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms