RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 AJUBAQ96IF1 538 aa12.42□□□□□ -0.42
TRIM28-203ENST00000593582 MEGF9Q9H1U4 602 aa12.42□□□□□ -0.42
TRIM28-203ENST00000593582 CHCHD3Q9NX63 227 aaKnown RBP12.42□□□□□ -0.42
TRIM28-203ENST00000593582 DIMT1Q9UNQ2 313 aaKnown RBP12.42□□□□□ -0.42
TRIM28-203ENST00000593582 EXOSC1Q9Y3B2 195 aaKnown RBP12.42□□□□□ -0.42
TRIM28-203ENST00000593582 LINC00312Q9Y6C7 94 aa12.42□□□□□ -0.42
TRIM28-203ENST00000593582 SIRPB1O00241 398 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 OR2H2O95918 312 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 CD2P06729 351 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 IGHV1-8P0DP01 117 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 RAB3AP20336 220 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 ERP29P30040 261 aaKnown RBP12.41□□□□□ -0.42
TRIM28-203ENST00000593582 OR3A1P47881 315 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 SOX2P48431 317 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 ADARB1P78563 741 aaKnown RBP12.41□□□□□ -0.42
TRIM28-203ENST00000593582 CDK5R1Q15078 307 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 OR2G6Q5TZ20 316 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 Q6ZSV7 163 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 RNF144BQ7Z419 303 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 TPRX1Q8N7U7 411 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 OR4S1Q8NGB4 309 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 TMEM80Q96HE8 168 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 BABAM2Q9NXR7 383 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 HSPE1-MOB4S4R3N1 261 aa12.41□□□□□ -0.42
TRIM28-203ENST00000593582 PKD1L1Q8TDX9 2849 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 FUOMA2VDF0 154 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 ARG1P05089 322 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 ZNF44P15621 663 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 P2RX3P56373 397 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 ZP1P60852 638 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 SCN1BQ07699 218 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 XAF1Q6GPH4 301 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 BRICD5Q6PL45 260 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 CRIP3Q6Q6R5 217 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 TCF23Q7RTU1 214 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 TRAPPC6BQ86SZ2 158 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 RGP1Q92546 391 aaPredicted RBP12.4□□□□□ -0.42
TRIM28-203ENST00000593582 FOXRED1Q96CU9 486 aaPredicted RBP12.4□□□□□ -0.42
TRIM28-203ENST00000593582 GPER1Q99527 375 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 PPA2Q9H2U2 334 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 C16orf95Q9H693 158 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 RAB18Q9NP72 206 aa12.4□□□□□ -0.42
TRIM28-203ENST00000593582 TBL2Q9Y4P3 447 aaKnown RBP12.4□□□□□ -0.42
TRIM28-203ENST00000593582 FAM90A8PA6NJQ4 464 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 DEGS1O15121 323 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 TSPAN9O75954 239 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 LMO1P25800 156 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 PAX6P26367 422 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 CAPGP40121 348 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 MTNR1BP49286 362 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 SRSF4Q08170 494 aaKnown RBP12.39□□□□□ -0.43
TRIM28-203ENST00000593582 DYNC1I2Q13409 638 aaKnown RBP12.39□□□□□ -0.43
TRIM28-203ENST00000593582 LY6EQ16553 131 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 OGFRL1Q5TC84 451 aaPredicted RBP12.39□□□□□ -0.43
TRIM28-203ENST00000593582 ZNF626Q68DY1 528 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 ZNF529Q6P280 563 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 LHFPL4Q7Z7J7 247 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 SATL1Q86VE3 508 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 C8orf59Q8N0T1 100 aaPredicted RBP12.39□□□□□ -0.43
TRIM28-203ENST00000593582 CHST4Q8NCG5 386 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 OR11H6Q8NGC7 330 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 RPS4Y2Q8TD47 263 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 TMEM106AQ96A25 262 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 SMIM19Q96E16 107 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 MALSU1Q96EH3 234 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 VCXQ9H320 206 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 TAS2R4Q9NYW5 299 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 CLEC2DQ9UHP7 191 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 ZNF281Q9Y2X9 895 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 UBE2J1Q9Y385 318 aaPredicted RBP12.39□□□□□ -0.43
TRIM28-203ENST00000593582 SESN1Q9Y6P5 492 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 MGAM2Q2M2H8 2515 aa12.39□□□□□ -0.43
TRIM28-203ENST00000593582 TRGV10A0A0A0MS01 117 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 A0A0G2JK05 382 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 EFCAB10A6NFE3 127 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 ODF3BA8MYP8 253 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 ANKRD65E5RJM6 399 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 CASQ2O14958 399 aaPredicted RBP12.38□□□□□ -0.43
TRIM28-203ENST00000593582 OGG1O15527 345 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 CLPXO76031 633 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 GNAO1P09471 354 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 PPP3R1P63098 170 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 ST3GAL4Q11206 333 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 LIAT1Q6ZQX7 453 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 PXT1Q8NFP0 134 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 OR51A2Q8NGJ7 313 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 OR52N1Q8NH53 320 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 TNFAIP8L1Q8WVP5 186 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 GGHQ92820 318 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 CITED1Q99966 193 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 FAM192AQ9GZU8 254 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 GAL3ST2Q9H3Q3 398 aa12.38□□□□□ -0.43
TRIM28-203ENST00000593582 SIRT4Q9Y6E7 314 aaPredicted RBP12.38□□□□□ -0.43
TRIM28-203ENST00000593582 VGLL3A8MV65 326 aa12.37□□□□□ -0.43
TRIM28-203ENST00000593582 SLC33A1O00400 549 aaPredicted RBP12.37□□□□□ -0.43
TRIM28-203ENST00000593582 CSN2P05814 226 aa12.37□□□□□ -0.43
TRIM28-203ENST00000593582 GABRA5P31644 462 aa12.37□□□□□ -0.43
TRIM28-203ENST00000593582 PROK1P58294 105 aa12.37□□□□□ -0.43
TRIM28-203ENST00000593582 AESQ08117 197 aa12.37□□□□□ -0.43
TRIM28-203ENST00000593582 RSU1Q15404 277 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms