RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 MELTFP08582 738 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 HKR1P10072 659 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 CAPZA1P52907 286 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 RPL31P62899 125 aaKnown RBP9.16□□□□□ -0.94
SMAD4-211ENST00000590499 PRB3Q04118 309 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-211ENST00000590499 KLRD1Q13241 179 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 ZNF273Q14593 569 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 ZNF146Q15072 292 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 TMEM200BQ69YZ2 307 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 DMKNQ6E0U4 476 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-211ENST00000590499 C17orf107Q6ZR85 190 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 SERPINA12Q8IW75 414 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 PDZD9Q8IXQ8 264 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 FAM185AQ8N0U4 392 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 FAM58AQ8N1B3 248 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 TSEN15Q8WW01 171 aaKnown RBP9.16□□□□□ -0.94
SMAD4-211ENST00000590499 EMG1Q92979 244 aaKnown RBP9.16□□□□□ -0.94
SMAD4-211ENST00000590499 RFT1Q96AA3 541 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 SMIM19Q96E16 107 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 VCXQ9H320 206 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 METTL8Q9H825 291 aaKnown RBP9.16□□□□□ -0.94
SMAD4-211ENST00000590499 BABAM2Q9NXR7 383 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 H0YJX3 145 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 HAND1O96004 215 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 C21orf33P30042 268 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-211ENST00000590499 UBE2E1P51965 193 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 AQP4P55087 323 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 DLX6P56179 175 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 RPS11P62280 158 aaKnown RBP eCLIP9.15□□□□□ -0.94
SMAD4-211ENST00000590499 KISS1Q15726 138 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 SPIN3Q5JUX0 258 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 NCR3LG1Q68D85 454 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 TCF23Q7RTU1 214 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 LDLRAD3Q86YD5 345 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 SAXO1Q8IYX7 474 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 OR8H2Q8N162 312 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 TMEM86BQ8N661 226 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 ASCC1Q8N9N2 400 aaKnown RBP9.15□□□□□ -0.94
SMAD4-211ENST00000590499 ZSCAN4Q8NAM6 433 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-211ENST00000590499 OR4M1Q8NGD0 313 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 OR51A2Q8NGJ7 313 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 OR5D18Q8NGL1 313 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 OR5D14Q8NGL3 314 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 GPR148Q8TDV2 347 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 GCDHQ92947 438 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-211ENST00000590499 SLC25A28Q96A46 364 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 PGLYRP3Q96LB9 341 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 HMG20AQ9NP66 347 aa9.15□□□□□ -0.94
SMAD4-211ENST00000590499 TRBV5-5A0A0J9YX44 114 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 ERICH4A6NGS2 130 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 H3BS24 57 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 NPFFO15130 113 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 PSPNO60542 156 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 CYB5AP00167 134 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 CCL3L1P16619 93 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 PRKACAP17612 351 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 DUSP1P28562 367 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 SOX2P48431 317 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 MED21Q13503 144 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 BLMHQ13867 455 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 AWAT1Q58HT5 328 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 C12orf54Q6X4T0 127 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 AHSA2Q719I0 299 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 PNKDQ8N490 385 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 OR52N4Q8NGI2 321 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 OR5D13Q8NGL4 314 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 OR13C5Q8NGS8 318 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 TBC1D15Q8TC07 691 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 GHSRQ92847 366 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 TMEM106AQ96A25 262 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 AJUBAQ96IF1 538 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 SNX22Q96L94 193 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 RHOFQ9HBH0 211 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 NEK6Q9HC98 313 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 TAS2R4Q9NYW5 299 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 ZNF281Q9Y2X9 895 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 POMT1Q9Y6A1 747 aa9.14□□□□□ -0.95
SMAD4-211ENST00000590499 NBEAL1Q6ZS30 2694 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 C17orf98A8MV24 154 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 GABRPO00591 440 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 CD2P06729 351 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 HCKP08631 526 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 OCM2P0CE71 109 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 OCMP0CE72 109 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-211ENST00000590499 CALCBP10092 127 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 RAB3AP20336 220 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 EEF1B2P24534 225 aaKnown RBP9.13□□□□□ -0.95
SMAD4-211ENST00000590499 CFPP27918 469 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 SAA4P35542 130 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 IER3P46695 156 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 OR3A1P47881 315 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 ERVFRD-1P60508 538 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 ACSM1Q08AH1 577 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 YIF1BQ5BJH7 314 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 RNLSQ5VYX0 342 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 C16orf87Q6PH81 154 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 FIP1L1Q6UN15 594 aaKnown RBP9.13□□□□□ -0.95
SMAD4-211ENST00000590499 ZFP41Q8N8Y5 198 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 PXT1Q8NFP0 134 aa9.13□□□□□ -0.95
SMAD4-211ENST00000590499 BPIFB6Q8NFQ5 453 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms