RNA–Protein interactions for RNA: ENST00000589727.5

ATP6V0A1-222, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 5

Gene ATP6V0A1, Length 664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-222	ENST00000589727	RFPL4A	A6NLU0	287 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	OOSP1	A8MZH6	123 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	RFPL4AL1	F8VTS6	287 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727		M0QYG6	137 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	UBD	O15205	165 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	SLC16A6	O15403	523 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	SNN	O75324	88 aa	Predicted RBP	4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	HSPB1	P04792	205 aa	Known RBP	4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	LGALS1	P09382	135 aa	Known RBP	4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	HOXB9	P17482	250 aa	Predicted RBP	4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	RAB9A	P51151	201 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	RPL27	P61353	136 aa	Known RBP	4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	LSM6	P62312	80 aa	Known RBP	4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	SCARB2	Q14108	478 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	KRTAP27-1	Q3LI81	207 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	AGBL2	Q5U5Z8	902 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727		Q6ZWC4	215 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	TGIF2LX	Q8IUE1	241 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	LAX1	Q8IWV1	398 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	C10orf67	Q8IYJ2	551 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	TRMT10A	Q8TBZ6	339 aa	Known RBP	4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	RASSF5	Q8WWW0	418 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	MICU1	Q9BPX6	476 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	ZNF426	Q9BUY5	554 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	WDR55	Q9H6Y2	383 aa	Predicted RBP	4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	SP140L	Q9H930	580 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	LIN7C	Q9NUP9	197 aa	Known RBP	4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	PNPO	Q9NVS9	261 aa		4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	LRP1	Q07954	4544 aa	Known RBP	4.98	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	IGHV4-4	A0A075B6R2	117 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727		A0A1W2PPI3	338 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	TRAPPC13	A5PLN9	417 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727		A6NIZ1	184 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	EVPLL	A8MZ36	301 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	C11orf94	C9JXX5	98 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	BUB1B-PAK6	H3BSN5	160 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727		H7C1C5	153 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	MTRF1	O75570	445 aa	Known RBP	4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	OR5F1	O95221	314 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	IFNA14	P01570	189 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	TK1	P04183	234 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	FUT1	P19526	365 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	PRDX2	P32119	198 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	DDOST	P39656	456 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	RBM34	P42696	430 aa	Known RBP	4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	GPR4	P46093	362 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	GTF2A1	P52655	376 aa	Predicted RBP	4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	TPTE	P56180	551 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	EDDM3B	P56851	147 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	RAP1B	P61224	184 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	LCN6	P62502	163 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	RAP1A	P62834	184 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	ADARB1	P78563	741 aa	Known RBP	4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	RAB40B	Q12829	278 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	TAF13	Q15543	124 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	GLYATL3	Q5SZD4	288 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	PVRIG	Q6DKI7	326 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	RTN4RL2	Q86UN3	420 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	CD177	Q8N6Q3	437 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	C11orf65	Q8NCR3	313 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	OR9I1	Q8NGQ6	314 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	C17orf77	Q96MU5	243 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	MCHR1	Q99705	422 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	POLR2J2	Q9GZM3	115 aa	Known RBP	4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	POLR2J3	Q9H1A7	115 aa	Known RBP	4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	PCDHB16	Q9NRJ7	776 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	SLC25A37	Q9NYZ2	338 aa		4.97	□□□□□ -1.61
ATP6V0A1-222	ENST00000589727	TRBV5-3	A0A0A0MS03	114 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	TEX13C	A0A0J9YWL9	993 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	TMEM210	A6NLX4	147 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	ANXA2P2	A6NMY6	339 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	ZNF850	A8MQ14	1090 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	LY6L	H3BQJ8	138 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	TOR1A	O14656	332 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	TPST1	O60507	370 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	TPST2	O60704	377 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	IFNA10	P01566	189 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	IGKV1D-33	P01593	117 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	IGKV1-33	P01594	117 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	IGLV1-47	P01700	117 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	SMR3B	P02814	79 aa	Predicted RBP	4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	KIT	P10721	976 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	GPX2	P18283	190 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	AQP1	P29972	269 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	PPIF	P30405	207 aa	Known RBP	4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	ASIP	P42127	132 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	SLC18A1	P54219	525 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	XG	P55808	180 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	HIST1H3A	P68431	136 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	SSBP2	P81877	361 aa	Predicted RBP	4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	RBM39	Q14498	530 aa	Known RBP	4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	SNAI3	Q3KNW1	292 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	ALG10	Q5BKT4	473 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	TNFAIP8L3	Q5GJ75	292 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	ENTPD8	Q5MY95	495 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	HIST2H3PS2	Q5TEC6	136 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	CORO6	Q6QEF8	472 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	IL34	Q6ZMJ4	242 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	HIST2H3A	Q71DI3	136 aa		4.96	□□□□□ -1.62
ATP6V0A1-222	ENST00000589727	ZNF367	Q7RTV3	350 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms