RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 SEBOXQ9HB31 216 aaPredicted RBP16.66■□□□□ 0.26
DNMT1-216ENST00000588952 KAAG1Q9UBP8 84 aa16.66■□□□□ 0.26
DNMT1-216ENST00000588952 MAP1AP78559 2803 aaPredicted RBP16.66■□□□□ 0.26
DNMT1-216ENST00000588952 MYO9AB2RTY4 2548 aa16.66■□□□□ 0.26
DNMT1-216ENST00000588952 OTOGQ6ZRI0 2925 aa16.66■□□□□ 0.26
DNMT1-216ENST00000588952 ZNF469Q96JG9 3925 aaPredicted RBP16.65■□□□□ 0.26
DNMT1-216ENST00000588952 TRAV24A0A0B4J272 114 aa16.65■□□□□ 0.26
DNMT1-216ENST00000588952 NKX6-3A6NJ46 265 aa16.65■□□□□ 0.26
DNMT1-216ENST00000588952 NDUFA2O43678 99 aa16.65■□□□□ 0.26
DNMT1-216ENST00000588952 PSPNO60542 156 aa16.65■□□□□ 0.26
DNMT1-216ENST00000588952 ZNF737O75373 536 aa16.65■□□□□ 0.26
DNMT1-216ENST00000588952 GABRR1P24046 479 aa16.65■□□□□ 0.26
DNMT1-216ENST00000588952 SLIRPQ9GZT3 109 aaKnown RBP16.65■□□□□ 0.26
DNMT1-216ENST00000588952 ABRACLQ9P1F3 81 aa16.65■□□□□ 0.26
DNMT1-216ENST00000588952 MIOXQ9UGB7 285 aa16.65■□□□□ 0.26
DNMT1-216ENST00000588952 RAB22AQ9UL26 194 aa16.65■□□□□ 0.26
DNMT1-216ENST00000588952 PCDHB10Q9UN67 800 aa16.65■□□□□ 0.26
DNMT1-216ENST00000588952 CR1P17927 2039 aa16.65■□□□□ 0.26
DNMT1-216ENST00000588952 SLC33A1O00400 549 aaPredicted RBP16.64■□□□□ 0.25
DNMT1-216ENST00000588952 SH2D1BO14796 132 aa16.64■□□□□ 0.25
DNMT1-216ENST00000588952 DEGS1O15121 323 aa16.64■□□□□ 0.25
DNMT1-216ENST00000588952 TMEM127O75204 238 aa16.64■□□□□ 0.25
DNMT1-216ENST00000588952 CHRM2P08172 466 aa16.64■□□□□ 0.25
DNMT1-216ENST00000588952 ZNF44P15621 663 aa16.64■□□□□ 0.25
DNMT1-216ENST00000588952 RAB6AP20340 208 aa16.64■□□□□ 0.25
DNMT1-216ENST00000588952 IL13RA1P78552 427 aa16.64■□□□□ 0.25
DNMT1-216ENST00000588952 LOXL1Q08397 574 aaPredicted RBP16.64■□□□□ 0.25
DNMT1-216ENST00000588952 C17orf107Q6ZR85 190 aa16.64■□□□□ 0.25
DNMT1-216ENST00000588952 KCTD12Q96CX2 325 aaKnown RBP16.64■□□□□ 0.25
DNMT1-216ENST00000588952 NEIL1Q96FI4 390 aaPredicted RBP16.64■□□□□ 0.25
DNMT1-216ENST00000588952 IFT22Q9H7X7 185 aa16.64■□□□□ 0.25
DNMT1-216ENST00000588952 SPATA2Q9UM82 520 aa16.64■□□□□ 0.25
DNMT1-216ENST00000588952 ETV7Q9Y603 341 aa16.64■□□□□ 0.25
DNMT1-216ENST00000588952 ITPR3Q14573 2671 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 ABCA2Q9BZC7 2435 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 FOXI3A8MTJ6 420 aaPredicted RBP16.63■□□□□ 0.25
DNMT1-216ENST00000588952 FAM157AC9JC47 383 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 H7C1Q1 480 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 HSPB6O14558 160 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 DVL1O14640 695 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 SOCS1O15524 211 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 OR7C1O76099 320 aaPredicted RBP16.63■□□□□ 0.25
DNMT1-216ENST00000588952 LMO1P25800 156 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 RANBP1P43487 201 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 OR3A1P47881 315 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 PITPNBP48739 271 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 SCAND1P57086 179 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 MPV17LQ2QL34 196 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 MOGAT2Q3SYC2 334 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 BRICD5Q6PL45 260 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 SLC36A1Q7Z2H8 476 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 LINC00596Q86U02 117 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 ZNF561Q8N587 486 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 FAM89BQ8N5H3 189 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 ASCC1Q8N9N2 400 aaKnown RBP16.63■□□□□ 0.25
DNMT1-216ENST00000588952 OR4S1Q8NGB4 309 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 OR8B3Q8NGG8 313 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 PTX4Q96A99 478 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 OR8B2Q96RD0 313 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 CHST6Q9GZX3 395 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 SHARPINQ9H0F6 387 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 BATF3Q9NR55 127 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 RCC2Q9P258 522 aaKnown RBP16.63■□□□□ 0.25
DNMT1-216ENST00000588952 COMMD3Q9UBI1 195 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 GLS2Q9UI32 602 aa16.63■□□□□ 0.25
DNMT1-216ENST00000588952 KIAA1324LA8MWY0 1029 aaPredicted RBP16.62■□□□□ 0.25
DNMT1-216ENST00000588952 PHF1O43189 567 aaPredicted RBP16.62■□□□□ 0.25
DNMT1-216ENST00000588952 CPT2P23786 658 aa16.62■□□□□ 0.25
DNMT1-216ENST00000588952 SOX6P35712 828 aa16.62■□□□□ 0.25
DNMT1-216ENST00000588952 VEGFCP49767 419 aa16.62■□□□□ 0.25
DNMT1-216ENST00000588952 SUMF2Q8NBJ7 301 aa16.62■□□□□ 0.25
DNMT1-216ENST00000588952 TMEM185AQ8NFB2 350 aa16.62■□□□□ 0.25
DNMT1-216ENST00000588952 MED30Q96HR3 178 aa16.62■□□□□ 0.25
DNMT1-216ENST00000588952 URM1Q9BTM9 101 aaKnown RBP16.62■□□□□ 0.25
DNMT1-216ENST00000588952 MRI1Q9BV20 369 aa16.62■□□□□ 0.25
DNMT1-216ENST00000588952 PPA2Q9H2U2 334 aa16.62■□□□□ 0.25
DNMT1-216ENST00000588952 RHBDL2Q9NX52 303 aa16.62■□□□□ 0.25
DNMT1-216ENST00000588952 FAM90A10PA6NDY2 464 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 FAM90A18PA6NE21 464 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 FAM90A16PA6NEW6 464 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 FAM90A20PA6NIJ5 464 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 FAM90A8PA6NJQ4 464 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 FAM90A7PA6NKC0 464 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 FAM90A22PA8MWA6 464 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 FAM90A12PA8MX19 464 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 FAM90A5PA8MXJ8 464 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 FAM90A23PA8MXZ1 464 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 K7N7A8 449 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 TK1P04183 234 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 FAM90A15PP0C7V4 464 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 FAM90A13PP0C7W8 464 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 FAM90A14PP0C7W9 464 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 FAM90A24PP0C7X0 464 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 ZFP36P26651 326 aaKnown RBP16.61■□□□□ 0.25
DNMT1-216ENST00000588952 CHATP28329 748 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 TMEM50BP56557 158 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 DYNC1I2Q13409 638 aaKnown RBP16.61■□□□□ 0.25
DNMT1-216ENST00000588952 ATAD3CQ5T2N8 411 aa16.61■□□□□ 0.25
DNMT1-216ENST00000588952 WDR25Q64LD2 544 aaPredicted RBP16.61■□□□□ 0.25
DNMT1-216ENST00000588952 NLRC3Q7RTR2 1065 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms