RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 ASB8Q9H765 288 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 METTL17Q9H7H0 456 aaPredicted RBP3.84□□□□□ -1.79
SS18-223ENST00000583595 TUBA4BQ9H853 241 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 ADAP2Q9NPF8 381 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 ISYNA1Q9NPH2 558 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 MIEF1Q9NQG6 463 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 VNN3Q9NY84 501 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 CALML5Q9NZT1 146 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 B4GALT7Q9UBV7 327 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 MMP17Q9ULZ9 603 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 MOKQ9UQ07 419 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 SCN11AQ9UI33 1791 aa3.84□□□□□ -1.8
SS18-223ENST00000583595 UBR3Q6ZT12 1888 aa3.84□□□□□ -1.8
SS18-223ENST00000583595 DENND4AQ7Z401 1863 aa3.84□□□□□ -1.8
SS18-223ENST00000583595 A0A096LPI6 279 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 LOC285095A0A1B0GVY8 99 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 SEC14L6B5MCN3 397 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 M0R143 59 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 SLC16A4O15374 487 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 MPZL2O60487 215 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 GALR3O60755 368 aaPredicted RBP3.83□□□□□ -1.8
SS18-223ENST00000583595 HOXA9P31269 272 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 IL2RGP31785 369 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 EVX1P49640 407 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 IDH3GP51553 393 aaPredicted RBP3.83□□□□□ -1.8
SS18-223ENST00000583595 RAP1BP61224 184 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 RBX1P62877 108 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 EIF5AP63241 154 aaKnown RBP3.83□□□□□ -1.8
SS18-223ENST00000583595 MRPS10P82664 201 aaKnown RBP3.83□□□□□ -1.8
SS18-223ENST00000583595 ST3GAL4Q11206 333 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 RSU1Q15404 277 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 SSX1Q16384 188 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 ZNF506Q5JVG8 444 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 HIST2H3PS2Q5TEC6 136 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 TMEM244Q5VVB8 128 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 ZNF660Q6AZW8 331 aaPredicted RBP3.83□□□□□ -1.8
SS18-223ENST00000583595 TRIM40Q6P9F5 258 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 ABHD13Q7L211 337 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 SSX6Q7RTT6 188 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 TMEM179BQ7Z7N9 219 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 NRMQ8IXM6 262 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 HS3ST5Q8IZT8 346 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 HSD17B11Q8NBQ5 300 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 INO80EQ8NBZ0 244 aaPredicted RBP3.83□□□□□ -1.8
SS18-223ENST00000583595 GPR26Q8NDV2 337 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 OR6T1Q8NGN1 323 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 TERB2Q8NHR7 220 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 SDR42E1Q8WUS8 393 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 LCN9Q8WX39 176 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 CACNG8Q8WXS5 425 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 HIST1H2BAQ96A08 127 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 SLC25A38Q96DW6 304 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 FAM210BQ96KR6 192 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 JSRP1Q96MG2 331 aaPredicted RBP3.83□□□□□ -1.8
SS18-223ENST00000583595 KCTD7Q96MP8 289 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 MCEEQ96PE7 176 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 GPR22Q99680 433 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 ZNF2Q9BSG1 426 aaPredicted RBP3.83□□□□□ -1.8
SS18-223ENST00000583595 TMEM208Q9BTX3 173 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 TM6SF2Q9BZW4 377 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 OR52A5Q9H2C5 316 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 POMKQ9H5K3 350 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 PTGES2Q9H7Z7 377 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 JPT2Q9H910 190 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 LHX9Q9NQ69 397 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 NDUFB11Q9NX14 153 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 DHRS4-AS1Q9P1J3 65 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 RPS6KB2Q9UBS0 482 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 APOBEC3BQ9UH17 382 aaKnown RBP3.83□□□□□ -1.8
SS18-223ENST00000583595 FBXL3Q9UKT7 428 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 UBQLN1Q9UMX0 589 aaKnown RBP3.83□□□□□ -1.8
SS18-223ENST00000583595 SLC35A3Q9Y2D2 325 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 POFUT2Q9Y2G5 429 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 KCPQ6ZWJ8 1503 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 ADAMTS7Q9UKP4 1686 aa3.83□□□□□ -1.8
SS18-223ENST00000583595 ITGB4P16144 1822 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 SLX4Q8IY92 1834 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 IGLV7-46A0A075B6I9 117 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 A0A0D9SG52 128 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 A0A0G2JRQ6 117 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 A0A1W2PRD5 423 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 IQCF5A8MTL0 148 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 A8MWP6 167 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 H7C417 338 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 CXCR6O00574 342 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 SOCS3O14543 225 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 TP53I11O14683 189 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 ARPC5O15511 151 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 OR2A4O95047 310 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 AHSA1O95433 338 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 RENP00797 406 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 IGLV1-44P01699 117 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 FGF7P21781 194 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 VDAC1P21796 283 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 IGHV1-2P23083 117 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 GABRR1P24046 479 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 OR1E1P30953 314 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 BTCP35070 178 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 GLP1RP43220 463 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 TDGF1P3P51864 188 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms