RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 ZNF488Q96MN9 340 aa17.06■□□□□ 0.32
CCDC42-203ENST00000581598 FAM234AQ9H0X4 552 aa17.06■□□□□ 0.32
CCDC42-203ENST00000581598 MEGF9Q9H1U4 602 aa17.06■□□□□ 0.32
CCDC42-203ENST00000581598 NDUFB11Q9NX14 153 aa17.06■□□□□ 0.32
CCDC42-203ENST00000581598 M0QZ24 198 aa17.05■□□□□ 0.32
CCDC42-203ENST00000581598 CCRL2O00421 344 aa17.05■□□□□ 0.32
CCDC42-203ENST00000581598 NXPH2O95156 264 aa17.05■□□□□ 0.32
CCDC42-203ENST00000581598 ERVK11-1P61568 191 aa17.05■□□□□ 0.32
CCDC42-203ENST00000581598 RPL31P62899 125 aaKnown RBP17.05■□□□□ 0.32
CCDC42-203ENST00000581598 AANATQ16613 207 aa17.05■□□□□ 0.32
CCDC42-203ENST00000581598 LIPKQ5VXJ0 399 aa17.05■□□□□ 0.32
CCDC42-203ENST00000581598 CALHM1Q8IU99 346 aa17.05■□□□□ 0.32
CCDC42-203ENST00000581598 C11orf42Q8N5U0 333 aa17.05■□□□□ 0.32
CCDC42-203ENST00000581598 AJUBAQ96IF1 538 aa17.05■□□□□ 0.32
CCDC42-203ENST00000581598 PDCD1LG2Q9BQ51 273 aa17.05■□□□□ 0.32
CCDC42-203ENST00000581598 HEXA-AS1Q9H8Q6 139 aa17.05■□□□□ 0.32
CCDC42-203ENST00000581598 PNMA8CA0A1B0GUJ8 204 aa17.04■□□□□ 0.32
CCDC42-203ENST00000581598 ANKRD61A6NGH8 418 aa17.04■□□□□ 0.32
CCDC42-203ENST00000581598 ISG15P05161 165 aa17.04■□□□□ 0.32
CCDC42-203ENST00000581598 UBCP0CG48 685 aaKnown RBP17.04■□□□□ 0.32
CCDC42-203ENST00000581598 TMEM200BQ69YZ2 307 aa17.04■□□□□ 0.32
CCDC42-203ENST00000581598 ASPHD2Q6ICH7 369 aa17.04■□□□□ 0.32
CCDC42-203ENST00000581598 OR5AK2Q8NH90 309 aa17.04■□□□□ 0.32
CCDC42-203ENST00000581598 GHSRQ92847 366 aa17.04■□□□□ 0.32
CCDC42-203ENST00000581598 YIPF6Q96EC8 236 aa17.04■□□□□ 0.32
CCDC42-203ENST00000581598 MMP27Q9H306 513 aa17.04■□□□□ 0.32
CCDC42-203ENST00000581598 DSCAML1Q8TD84 2053 aa17.04■□□□□ 0.32
CCDC42-203ENST00000581598 hCG_1809904A0A1W2PP81 198 aa17.03■□□□□ 0.32
CCDC42-203ENST00000581598 A0A1W2PPE2 198 aa17.03■□□□□ 0.32
CCDC42-203ENST00000581598 A0A1W2PR64 198 aa17.03■□□□□ 0.32
CCDC42-203ENST00000581598 A0A1W2PRV1 198 aa17.03■□□□□ 0.32
CCDC42-203ENST00000581598 ANGPTL7O43827 346 aa17.03■□□□□ 0.32
CCDC42-203ENST00000581598 TK1P04183 234 aa17.03■□□□□ 0.32
CCDC42-203ENST00000581598 GABRA5P31644 462 aa17.03■□□□□ 0.32
CCDC42-203ENST00000581598 MKXQ8IYA7 352 aa17.03■□□□□ 0.32
CCDC42-203ENST00000581598 RGP1Q92546 391 aaPredicted RBP17.03■□□□□ 0.32
CCDC42-203ENST00000581598 C10orf35Q96D05 121 aa17.03■□□□□ 0.32
CCDC42-203ENST00000581598 COMMD4Q9H0A8 199 aa17.03■□□□□ 0.32
CCDC42-203ENST00000581598 PLEKHA1Q9HB21 404 aa17.03■□□□□ 0.32
CCDC42-203ENST00000581598 SLC7A11Q9UPY5 501 aa17.03■□□□□ 0.32
CCDC42-203ENST00000581598 ZNF281Q9Y2X9 895 aa17.03■□□□□ 0.32
CCDC42-203ENST00000581598 A6NIN4 97 aa17.02■□□□□ 0.32
CCDC42-203ENST00000581598 SYT7O43581 403 aa17.02■□□□□ 0.32
CCDC42-203ENST00000581598 GATBO75879 557 aaKnown RBP17.02■□□□□ 0.32
CCDC42-203ENST00000581598 RPS11P62280 158 aaKnown RBP eCLIP17.02■□□□□ 0.32
CCDC42-203ENST00000581598 RPS25P62851 125 aaKnown RBP17.02■□□□□ 0.32
CCDC42-203ENST00000581598 TMEM244Q5VVB8 128 aa17.02■□□□□ 0.32
CCDC42-203ENST00000581598 GPR141Q7Z602 305 aa17.02■□□□□ 0.32
CCDC42-203ENST00000581598 ANGPTL5Q86XS5 388 aa17.02■□□□□ 0.32
CCDC42-203ENST00000581598 ZNF676Q8N7Q3 588 aa17.02■□□□□ 0.32
CCDC42-203ENST00000581598 SSX3Q99909 188 aa17.02■□□□□ 0.32
CCDC42-203ENST00000581598 FBLN5Q9UBX5 448 aa17.02■□□□□ 0.32
CCDC42-203ENST00000581598 TRBV5-5A0A0J9YX44 114 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 LOC107986453A0A1B0GWG9 222 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 H3BUX3 64 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 K7N7A8 449 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 CD36P16671 472 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 PSMA1P25786 263 aaKnown RBP17.01■□□□□ 0.31
CCDC42-203ENST00000581598 CEBPDP49716 269 aaPredicted RBP17.01■□□□□ 0.31
CCDC42-203ENST00000581598 TRAM1Q15629 374 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 UBE2V2Q15819 145 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 LRRC75BQ2VPJ9 315 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 YIF1BQ5BJH7 314 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 CD200R1LQ6Q8B3 271 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 RDH10Q8IZV5 341 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 MS4A15Q8N5U1 240 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 C17orf50Q8WW18 174 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 CHST5Q9GZS9 411 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 SEBOXQ9HB31 216 aaPredicted RBP17.01■□□□□ 0.31
CCDC42-203ENST00000581598 TCF7L1Q9HCS4 588 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 HHLA2Q9UM44 414 aa17.01■□□□□ 0.31
CCDC42-203ENST00000581598 FAM230AA0A1W2PPH8 454 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 SC5DO75845 299 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 CHRM2P08172 466 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 GALP22466 123 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 FUT6P51993 359 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 ERVFRD-1P60508 538 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 ODF4Q2M2E3 257 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 SLC35E4Q6ICL7 350 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 CRIP3Q6Q6R5 217 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 SATL1Q86VE3 508 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 OR4M1Q8NGD0 313 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 OR10AC1Q8NH08 325 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 TRMT10AQ8TBZ6 339 aaKnown RBP17■□□□□ 0.31
CCDC42-203ENST00000581598 CEP19Q96LK0 163 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 PPA2Q9H2U2 334 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 OR14J1Q9UGF5 321 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 CMYA5Q8N3K9 4069 aa17■□□□□ 0.31
CCDC42-203ENST00000581598 IGKV1-27A0A075B6S5 117 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 C17orf98A8MV24 154 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 ZNF737O75373 536 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 SERPINA3P01011 423 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 RBP4P02753 201 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 CCL3L1P16619 93 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 DLX6P56179 175 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 DEFA6Q01524 100 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 ZNF273Q14593 569 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 LIAT1Q6ZQX7 453 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 OR13C5Q8NGS8 318 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 GPR148Q8TDV2 347 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms